RNA–Protein interactions for RNA: ENST00000419286.2

ATM-202, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-202ENST00000419286 DENND3A2RUS2 1198 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 PRSS46E5RG02 174 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 VEGFDO43915 354 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 PRPSAP2O60256 369 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 PRKNO60260 465 aaPredicted RBP3.81□□□□□ -1.8
ATM-202ENST00000419286 ZBTB11O95625 1053 aaPredicted RBP3.81□□□□□ -1.8
ATM-202ENST00000419286 IGHV4-31P0DP07 118 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 FERP16591 822 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 MSH3P20585 1137 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 EPHA2P29317 976 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 OR3A1P47881 315 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 ADARP55265 1226 aaKnown RBP3.81□□□□□ -1.8
ATM-202ENST00000419286 CDH11P55287 796 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 UCP2P55851 309 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 IL1RL1Q01638 556 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 TAF10Q12962 218 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 OPCMLQ14982 345 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 ACCSLQ4AC99 568 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 PHLDA2Q53GA4 152 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 STXBP5Q5T5C0 1151 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 PRAMEF8Q5VWM4 474 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 NADSYN1Q6IA69 706 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 IL17RELQ6ZVW7 336 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 PRUNE1Q86TP1 453 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 RTN4RL2Q86UN3 420 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 NFE4Q86UQ8 179 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 ZNF410Q86VK4 478 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 AQP12AQ8IXF9 295 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 ZNF444Q8N0Y2 327 aaPredicted RBP3.81□□□□□ -1.8
ATM-202ENST00000419286 MAPKAPK5-AS1Q8N8E1 139 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 MRPL43Q8N983 215 aaKnown RBP3.81□□□□□ -1.8
ATM-202ENST00000419286 LRRC8CQ8TDW0 803 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 SLC13A3Q8WWT9 602 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 TBC1D31Q96DN5 1066 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 TMEM237Q96Q45 408 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 PKP4Q99569 1192 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 FAM213AQ9BRX8 229 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 FAM49AQ9H0Q0 323 aaPredicted RBP3.81□□□□□ -1.8
ATM-202ENST00000419286 RIMS4Q9H426 269 aaPredicted RBP3.81□□□□□ -1.8
ATM-202ENST00000419286 CUEDC2Q9H467 287 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 UPF2Q9HAU5 1272 aaKnown RBP3.81□□□□□ -1.8
ATM-202ENST00000419286 A4GALTQ9NPC4 353 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 NOCTQ9UK39 431 aaKnown RBP3.81□□□□□ -1.8
ATM-202ENST00000419286 TSPAN16Q9UKR8 245 aa3.81□□□□□ -1.8
ATM-202ENST00000419286 FOXA2Q9Y261 457 aaPredicted RBP3.81□□□□□ -1.8
ATM-202ENST00000419286 HBS1LQ9Y450 684 aaKnown RBP3.81□□□□□ -1.8
ATM-202ENST00000419286 NPHP3Q7Z494 1330 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 A0A087X0K7 114 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 A0A0A6YYC8 382 aaPredicted RBP3.8□□□□□ -1.8
ATM-202ENST00000419286 PLSCR5A0PG75 271 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 KRT87PA6NCN2 255 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 I3L1I5 382 aaPredicted RBP3.8□□□□□ -1.8
ATM-202ENST00000419286 TULP2O00295 520 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 CAPN9O14815 690 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 ATP6V0E1O15342 81 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 B3GALNT1O75752 331 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 GRAP2O75791 330 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 PPP1R3DO95685 299 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 YES1P07947 543 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 SBK2P0C263 348 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 IGHV4-38-2P0DP08 117 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 FGF3P11487 239 aaPredicted RBP3.8□□□□□ -1.8
ATM-202ENST00000419286 PCP11498 1178 aaKnown RBP3.8□□□□□ -1.8
ATM-202ENST00000419286 LIFP15018 202 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 ELAVL4P26378 380 aaKnown RBP3.8□□□□□ -1.8
ATM-202ENST00000419286 ALDH4A1P30038 563 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 SSTR1P30872 391 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 LUMP51884 338 aaPredicted RBP3.8□□□□□ -1.8
ATM-202ENST00000419286 ZNF132P52740 706 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 CASP9P55211 416 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 POU3F1Q03052 451 aaPredicted RBP3.8□□□□□ -1.8
ATM-202ENST00000419286 SLC3A1Q07837 685 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 PPA1Q15181 289 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 UGP2Q16851 508 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 DCAF10Q5QP82 559 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 CAPRIN2Q6IMN6 1127 aaKnown RBP3.8□□□□□ -1.8
ATM-202ENST00000419286 KLHL10Q6JEL2 608 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 NEK5Q6P3R8 708 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 TTC27Q6P3X3 843 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 PRSS57Q6UWY2 283 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 G2E3Q7L622 706 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 CATSPER4Q7RTX7 472 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 C16orf82Q7Z2V1 217 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 RCOR2Q8IZ40 523 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 EID3Q8N140 333 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 SFRP1Q8N474 314 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 TMEM99Q8N816 258 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 OR13C3Q8NGS6 347 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 METTL21AQ8WXB1 218 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 RUNDC3BQ96NL0 473 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 CDCA3Q99618 268 aaPredicted RBP3.8□□□□□ -1.8
ATM-202ENST00000419286 TEX13AQ9BXU3 409 aaPredicted RBP3.8□□□□□ -1.8
ATM-202ENST00000419286 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 TMEM245Q9H330 911 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 TFB2MQ9H5Q4 396 aaKnown RBP3.8□□□□□ -1.8
ATM-202ENST00000419286 EXOC1Q9NV70 894 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 PTTG2Q9NZH5 202 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 C19orf25Q9UFG5 118 aaPredicted RBP3.8□□□□□ -1.8
ATM-202ENST00000419286 IL36AQ9UHA7 158 aa3.8□□□□□ -1.8
ATM-202ENST00000419286 TRMT6Q9UJA5 497 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms