RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 C10orf90Q96M02 699 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 DPH2Q9BQC3 489 aaPredicted RBP17.82■□□□□ 0.44
PTCD3-204ENST00000418628 CCDC77Q9BR77 488 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 FAM117AQ9C073 453 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 SPNS1Q9H2V7 528 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 PRORYQ9H606 182 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 CNOT10Q9H9A5 744 aaKnown RBP17.82■□□□□ 0.44
PTCD3-204ENST00000418628 WWOXQ9NZC7 414 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 GPRC5BQ9NZH0 403 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 CD274Q9NZQ7 290 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 COPG2Q9UBF2 871 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 ATMQ13315 3056 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 SYCE1LA8MT33 242 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 MAP2K7O14733 419 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 P2RX6O15547 441 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 WDR47O94967 919 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 SBK3P0C264 359 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 BCL6P41182 706 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 HSPA7P48741 367 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 PCDH1Q08174 1060 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 CDC16Q13042 620 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 GRM7Q14831 915 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 SETDB1Q15047 1291 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 WASHC2DQ5SRD0 308 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 CATSPEREQ5SY80 951 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 BROXQ5VW32 411 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 KLC3Q6P597 504 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 LRRC70Q7Z2Q7 622 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 LCA5Q86VQ0 697 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 PLD3Q8IV08 490 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 CT55Q8WUE5 264 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 EXT2Q93063 718 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 ALKBH8Q96BT7 664 aaKnown RBP17.81■□□□□ 0.44
PTCD3-204ENST00000418628 WDR34Q96EX3 536 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 SLC45A3Q96JT2 553 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 XPR1Q9UBH6 696 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 CROTQ9UKG9 612 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 PADI1Q9ULC6 663 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 KCNE2Q9Y6J6 123 aa17.81■□□□□ 0.44
PTCD3-204ENST00000418628 SUPT3HB4E1H0 165 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 C21orf140B9A014 251 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 DSCR3O14972 297 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 PRAMEF4O60810 478 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 CDH16O75309 829 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 SUPT3HO75486 399 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 STK16O75716 305 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 CCR8P51685 355 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 ARSFP54793 590 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 DNASE1L3Q13609 305 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 COL28A1Q2UY09 1125 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 CRTC2Q53ET0 693 aaPredicted RBP17.8■□□□□ 0.44
PTCD3-204ENST00000418628 FBXO48Q5FWF7 155 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 PRAMEF9Q5VWM5 478 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 SLCO4C1Q6ZQN7 724 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 ADCK2Q7Z695 626 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 CYP4X1Q8N118 509 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 HNRNPLLQ8WVV9 542 aaKnown RBP17.8■□□□□ 0.44
PTCD3-204ENST00000418628 CLIP3Q96DZ5 547 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 TM4SF19Q96DZ7 209 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 TSNARE1Q96NA8 513 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 CD244Q9BZW8 370 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 CHST8Q9H2A9 424 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 CPNE5Q9HCH3 593 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 CUTCQ9NTM9 273 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 DNAJC11Q9NVH1 559 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 DHCR7Q9UBM7 475 aaKnown RBP17.8■□□□□ 0.44
PTCD3-204ENST00000418628 IL17BQ9UHF5 180 aa17.8■□□□□ 0.44
PTCD3-204ENST00000418628 RUVBL1Q9Y265 456 aaKnown RBP17.8■□□□□ 0.44
PTCD3-204ENST00000418628 A0A1B0GX78 115 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 TRBC2A0A5B9 178 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 TK2O00142 265 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 LCMT2O60294 686 aaKnown RBP17.79■□□□□ 0.44
PTCD3-204ENST00000418628 RBP1P09455 135 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 RAB40ALP0C0E4 278 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 CCNYL3P0C7X3 344 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 GNAZP19086 355 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 DLSTP36957 453 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 AGTR2P50052 363 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 ALDH18A1P54886 795 aaKnown RBP17.79■□□□□ 0.44
PTCD3-204ENST00000418628 VAC14Q08AM6 782 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 HKDC1Q2TB90 917 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 ATG9BQ674R7 924 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 FAM199XQ6PEV8 388 aaPredicted RBP17.79■□□□□ 0.44
PTCD3-204ENST00000418628 NXPE4Q6UWF7 544 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 TMPRSS11BQ86T26 416 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 RIBC1Q8N443 379 aaPredicted RBP17.79■□□□□ 0.44
PTCD3-204ENST00000418628 CSNK1A1LQ8N752 337 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 TTC29Q8NA56 475 aaPredicted RBP17.79■□□□□ 0.44
PTCD3-204ENST00000418628 MFSD9Q8NBP5 474 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 OR2W6PQ8NHA6 318 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 ESAMQ96AP7 390 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 RUFY1Q96T51 708 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 MRPL57Q9BQC6 102 aaKnown RBP17.79■□□□□ 0.44
PTCD3-204ENST00000418628 NDC1Q9BTX1 674 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 EFHD1Q9BUP0 239 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 EHD1Q9H4M9 534 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 GPN2Q9H9Y4 310 aaPredicted RBP17.79■□□□□ 0.44
PTCD3-204ENST00000418628 SLC22A11Q9NSA0 550 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 STARD5Q9NSY2 213 aa17.79■□□□□ 0.44
PTCD3-204ENST00000418628 TBK1Q9UHD2 729 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms