RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 FKBP9O95302 570 aa13□□□□□ -0.33
SSB-204ENST00000417292 TSPAN12O95859 305 aa13□□□□□ -0.33
SSB-204ENST00000417292 OR56A5P0C7T3 313 aa13□□□□□ -0.33
SSB-204ENST00000417292 STIP1P31948 543 aaKnown RBP13□□□□□ -0.33
SSB-204ENST00000417292 FASTKQ14296 549 aaKnown RBP13□□□□□ -0.33
SSB-204ENST00000417292 OR1C1Q15619 314 aa13□□□□□ -0.33
SSB-204ENST00000417292 RNFT1Q5M7Z0 435 aa13□□□□□ -0.33
SSB-204ENST00000417292 H3F3CQ6NXT2 135 aa13□□□□□ -0.33
SSB-204ENST00000417292 ZC3H7AQ8IWR0 971 aaKnown RBP13□□□□□ -0.33
SSB-204ENST00000417292 DMRTC2Q8IXT2 367 aaPredicted RBP13□□□□□ -0.33
SSB-204ENST00000417292 SHISA5Q8N114 240 aa13□□□□□ -0.33
SSB-204ENST00000417292 GHDCQ8N2G8 530 aa13□□□□□ -0.33
SSB-204ENST00000417292 CHDHQ8NE62 594 aaPredicted RBP13□□□□□ -0.33
SSB-204ENST00000417292 OR2A1Q8NGT9 310 aa13□□□□□ -0.33
SSB-204ENST00000417292 LKAAEAR1Q8TD35 194 aa13□□□□□ -0.33
SSB-204ENST00000417292 MMABQ96EY8 250 aaPredicted RBP13□□□□□ -0.33
SSB-204ENST00000417292 UCK2Q9BZX2 261 aa13□□□□□ -0.33
SSB-204ENST00000417292 ETNK1Q9HBU6 452 aa13□□□□□ -0.33
SSB-204ENST00000417292 MKKSQ9NPJ1 570 aaPredicted RBP13□□□□□ -0.33
SSB-204ENST00000417292 CCM2LQ9NUG4 571 aaPredicted RBP13□□□□□ -0.33
SSB-204ENST00000417292 SLC39A10Q9ULF5 831 aa13□□□□□ -0.33
SSB-204ENST00000417292 MKL2Q9ULH7 1088 aa13□□□□□ -0.33
SSB-204ENST00000417292 CDC14AQ9UNH5 594 aa13□□□□□ -0.33
SSB-204ENST00000417292 RPH3AQ9Y2J0 694 aaPredicted RBP13□□□□□ -0.33
SSB-204ENST00000417292 HRH3Q9Y5N1 445 aa13□□□□□ -0.33
SSB-204ENST00000417292 A0A1W2PPV9 198 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 OR2A25A4D2G3 310 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 FOXO6A8MYZ6 492 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 H0YGG7 62 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 PRRG2O14669 202 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 ZSCAN12O43309 604 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 FOXS1O43638 330 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 GPC4O75487 556 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 RPN2P04844 631 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 C8orf89P0DMQ9 161 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 ERVK-10P10266 1014 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 MSNP26038 577 aaKnown RBP12.99□□□□□ -0.33
SSB-204ENST00000417292 FOXN2P32314 431 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 RPL22P35268 128 aaKnown RBP12.99□□□□□ -0.33
SSB-204ENST00000417292 GRIA1P42261 906 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 TERF1P54274 439 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 EMP3P54852 163 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 ARF3P61204 181 aaPredicted RBP12.99□□□□□ -0.33
SSB-204ENST00000417292 PPP2R2AP63151 447 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 FOXD4Q12950 439 aaPredicted RBP12.99□□□□□ -0.33
SSB-204ENST00000417292 POU6F1Q14863 301 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 CCNG2Q16589 344 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 HKDC1Q2TB90 917 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 BTBD16Q32M84 506 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 P3H1Q32P28 736 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 CCSMST1Q4G0I0 132 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 PLAG1Q6DJT9 500 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 UNC5DQ6UXZ4 953 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 CEP128Q6ZU80 1094 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 LANCL3Q6ZV70 420 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 GALNTL5Q7Z4T8 443 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.99□□□□□ -0.33
SSB-204ENST00000417292 CRLF3Q8IUI8 442 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 KLHDC8BQ8IXV7 354 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 ARHGEF39Q8N4T4 335 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 CCDC89Q8N998 374 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 OR52K1Q8NGK4 314 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 MVB12AQ96EY5 273 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 ZNF354BQ96LW1 612 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 ZFYVE21Q9BQ24 234 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 ZNF559Q9BR84 538 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 UTP23Q9BRU9 249 aaKnown RBP12.99□□□□□ -0.33
SSB-204ENST00000417292 FRMD8P1Q9BZ68 369 aaPredicted RBP12.99□□□□□ -0.33
SSB-204ENST00000417292 LRRC40Q9H9A6 602 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 RAB6BQ9NRW1 208 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 FEZ2Q9UHY8 353 aaPredicted RBP12.99□□□□□ -0.33
SSB-204ENST00000417292 PYCARDQ9ULZ3 195 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 RUVBL1Q9Y265 456 aaKnown RBP12.99□□□□□ -0.33
SSB-204ENST00000417292 JRKLQ9Y4A0 524 aa12.99□□□□□ -0.33
SSB-204ENST00000417292 CCDC162PA2VCL2 907 aa12.98□□□□□ -0.33
SSB-204ENST00000417292 IQCF5A8MTL0 148 aa12.98□□□□□ -0.33
SSB-204ENST00000417292 PRPF4O43172 522 aaKnown RBP eCLIP12.98□□□□□ -0.33
SSB-204ENST00000417292 ZNF189O75820 626 aaPredicted RBP12.98□□□□□ -0.33
SSB-204ENST00000417292 NEURL1O76050 574 aa12.98□□□□□ -0.33
SSB-204ENST00000417292 TOXO94900 526 aa12.98□□□□□ -0.33
SSB-204ENST00000417292 CD46P15529 392 aa12.98□□□□□ -0.33
SSB-204ENST00000417292 PSMA3P25788 255 aa12.98□□□□□ -0.33
SSB-204ENST00000417292 MSX1P28360 303 aa12.98□□□□□ -0.33
SSB-204ENST00000417292 PTGER1P34995 402 aa12.98□□□□□ -0.33
SSB-204ENST00000417292 SNRPNP63162 240 aaKnown RBP12.98□□□□□ -0.33
SSB-204ENST00000417292 MAT1AQ00266 395 aaKnown RBP12.98□□□□□ -0.33
SSB-204ENST00000417292 TRIP13Q15645 432 aaPredicted RBP12.98□□□□□ -0.33
SSB-204ENST00000417292 CCDC38Q502W7 563 aa12.98□□□□□ -0.33
SSB-204ENST00000417292 GSTA5Q7RTV2 222 aa12.98□□□□□ -0.33
SSB-204ENST00000417292 PRELID2Q8N945 189 aa12.98□□□□□ -0.33
SSB-204ENST00000417292 TMEM178AQ8NBL3 297 aa12.98□□□□□ -0.33
SSB-204ENST00000417292 LILRB4Q8NHJ6 448 aa12.98□□□□□ -0.33
SSB-204ENST00000417292 HMGCLL1Q8TB92 370 aa12.98□□□□□ -0.33
SSB-204ENST00000417292 STYXQ8WUJ0 223 aa12.98□□□□□ -0.33
SSB-204ENST00000417292 PPP1R2P1Q96PQ5 205 aa12.98□□□□□ -0.33
SSB-204ENST00000417292 VN1R1Q9GZP7 353 aa12.98□□□□□ -0.33
SSB-204ENST00000417292 LIME1Q9H400 295 aa12.98□□□□□ -0.33
SSB-204ENST00000417292 KCNN3Q9UGI6 736 aa12.98□□□□□ -0.33
SSB-204ENST00000417292 A0A0A6YYC8 382 aaPredicted RBP12.97□□□□□ -0.33
SSB-204ENST00000417292 MROH6A6NGR9 719 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms