RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ALOX12BO75342 701 aa24.08■■□□□ 1.45
VEGFA-208ENST00000417285 C8GP07360 202 aa24.08■■□□□ 1.45
VEGFA-208ENST00000417285 MRPL49Q13405 166 aaKnown RBP24.08■■□□□ 1.45
VEGFA-208ENST00000417285 ISLR2Q6UXK2 745 aa24.08■■□□□ 1.45
VEGFA-208ENST00000417285 GALNT7Q86SF2 657 aa24.08■■□□□ 1.45
VEGFA-208ENST00000417285 LAPTM4BQ86VI4 370 aa24.08■■□□□ 1.45
VEGFA-208ENST00000417285 KBTBD2Q8IY47 623 aa24.08■■□□□ 1.45
VEGFA-208ENST00000417285 MMABQ96EY8 250 aaPredicted RBP24.08■■□□□ 1.45
VEGFA-208ENST00000417285 PRAP1Q96NZ9 151 aa24.08■■□□□ 1.45
VEGFA-208ENST00000417285 PPANQ9NQ55 473 aaKnown RBP24.08■■□□□ 1.45
VEGFA-208ENST00000417285 CCDC177Q9NQR7 707 aaPredicted RBP24.08■■□□□ 1.45
VEGFA-208ENST00000417285 ABCF3Q9NUQ8 709 aa24.08■■□□□ 1.45
VEGFA-208ENST00000417285 IDSB3KWA1 339 aa24.07■■□□□ 1.44
VEGFA-208ENST00000417285 SLC16A5O15375 505 aa24.07■■□□□ 1.44
VEGFA-208ENST00000417285 SEMA7AO75326 666 aa24.07■■□□□ 1.44
VEGFA-208ENST00000417285 FDXRP22570 491 aa24.07■■□□□ 1.44
VEGFA-208ENST00000417285 IMPA1P29218 277 aa24.07■■□□□ 1.44
VEGFA-208ENST00000417285 Q0VFX4 171 aa24.07■■□□□ 1.44
VEGFA-208ENST00000417285 NR6A1Q15406 480 aa24.07■■□□□ 1.44
VEGFA-208ENST00000417285 HIF1AQ16665 826 aa24.07■■□□□ 1.44
VEGFA-208ENST00000417285 HIBCHQ6NVY1 386 aaPredicted RBP24.07■■□□□ 1.44
VEGFA-208ENST00000417285 IGDCC3Q8IVU1 814 aa24.07■■□□□ 1.44
VEGFA-208ENST00000417285 SPNS2Q8IVW8 549 aa24.07■■□□□ 1.44
VEGFA-208ENST00000417285 ARHGEF39Q8N4T4 335 aa24.07■■□□□ 1.44
VEGFA-208ENST00000417285 EEF1AKMT1Q8WVE0 214 aa24.07■■□□□ 1.44
VEGFA-208ENST00000417285 LRRC39Q96DD0 335 aa24.07■■□□□ 1.44
VEGFA-208ENST00000417285 THAP11Q96EK4 314 aa24.07■■□□□ 1.44
VEGFA-208ENST00000417285 CFAP36Q96G28 342 aa24.07■■□□□ 1.44
VEGFA-208ENST00000417285 PARVBQ9HBI1 364 aa24.07■■□□□ 1.44
VEGFA-208ENST00000417285 RNF14Q9UBS8 474 aa24.07■■□□□ 1.44
VEGFA-208ENST00000417285 PYCARDQ9ULZ3 195 aa24.07■■□□□ 1.44
VEGFA-208ENST00000417285 CHMP2BQ9UQN3 213 aa24.07■■□□□ 1.44
VEGFA-208ENST00000417285 CENPEQ02224 2701 aa24.07■■□□□ 1.44
VEGFA-208ENST00000417285 NSG1A0A0A6YYJ2 146 aa24.06■■□□□ 1.44
VEGFA-208ENST00000417285 A0A1W2PQ72 361 aa24.06■■□□□ 1.44
VEGFA-208ENST00000417285 HAT1O14929 419 aa24.06■■□□□ 1.44
VEGFA-208ENST00000417285 AHSGP02765 367 aa24.06■■□□□ 1.44
VEGFA-208ENST00000417285 HEXBP07686 556 aa24.06■■□□□ 1.44
VEGFA-208ENST00000417285 GABRB3P28472 473 aa24.06■■□□□ 1.44
VEGFA-208ENST00000417285 ELK3P41970 407 aa24.06■■□□□ 1.44
VEGFA-208ENST00000417285 AVPR1BP47901 424 aa24.06■■□□□ 1.44
VEGFA-208ENST00000417285 RPS15AP62244 130 aaKnown RBP24.06■■□□□ 1.44
VEGFA-208ENST00000417285 SP140Q13342 867 aa24.06■■□□□ 1.44
VEGFA-208ENST00000417285 ELOAQ14241 798 aaKnown RBP24.06■■□□□ 1.44
VEGFA-208ENST00000417285 TLR1Q15399 786 aa24.06■■□□□ 1.44
VEGFA-208ENST00000417285 B3GNTL1Q67FW5 361 aaPredicted RBP24.06■■□□□ 1.44
VEGFA-208ENST00000417285 MYO1HQ8N1T3 1032 aa24.06■■□□□ 1.44
VEGFA-208ENST00000417285 AMER3Q8N944 861 aa24.06■■□□□ 1.44
VEGFA-208ENST00000417285 TRIM51Q9BSJ1 452 aa24.06■■□□□ 1.44
VEGFA-208ENST00000417285 FAM129AQ9BZQ8 928 aa24.06■■□□□ 1.44
VEGFA-208ENST00000417285 SYNPO2LQ9H987 977 aa24.06■■□□□ 1.44
VEGFA-208ENST00000417285 ZNF160Q9HCG1 818 aa24.06■■□□□ 1.44
VEGFA-208ENST00000417285 UNC79Q9P2D8 2635 aa24.06■■□□□ 1.44
VEGFA-208ENST00000417285 ANKUB1A6NFN9 424 aa24.05■■□□□ 1.44
VEGFA-208ENST00000417285 TTI1O43156 1089 aa24.05■■□□□ 1.44
VEGFA-208ENST00000417285 FOXS1O43638 330 aa24.05■■□□□ 1.44
VEGFA-208ENST00000417285 CCND1P24385 295 aa24.05■■□□□ 1.44
VEGFA-208ENST00000417285 TSFMP43897 325 aaKnown RBP24.05■■□□□ 1.44
VEGFA-208ENST00000417285 ARL4CP56559 192 aa24.05■■□□□ 1.44
VEGFA-208ENST00000417285 AP2B1P63010 937 aa24.05■■□□□ 1.44
VEGFA-208ENST00000417285 TIAL1Q01085 375 aaKnown RBP eCLIP24.05■■□□□ 1.44
VEGFA-208ENST00000417285 MFAP5Q13361 173 aa24.05■■□□□ 1.44
VEGFA-208ENST00000417285 HP1BP3Q5SSJ5 553 aaPredicted RBP24.05■■□□□ 1.44
VEGFA-208ENST00000417285 RBM20Q5T481 1227 aaKnown RBP24.05■■□□□ 1.44
VEGFA-208ENST00000417285 C8orf44Q96CB5 159 aa24.05■■□□□ 1.44
VEGFA-208ENST00000417285 SNF8Q96H20 258 aa24.05■■□□□ 1.44
VEGFA-208ENST00000417285 CORO1CQ9ULV4 474 aaPredicted RBP24.05■■□□□ 1.44
VEGFA-208ENST00000417285 NOVA2Q9UNW9 492 aaKnown RBP24.05■■□□□ 1.44
VEGFA-208ENST00000417285 PDE10AQ9Y233 779 aa24.05■■□□□ 1.44
VEGFA-208ENST00000417285 TEX15Q9BXT5 2789 aa24.05■■□□□ 1.44
VEGFA-208ENST00000417285 NOTCH2Q04721 2471 aa24.05■■□□□ 1.44
VEGFA-208ENST00000417285 HIVEP3Q5T1R4 2406 aa24.04■■□□□ 1.44
VEGFA-208ENST00000417285 ICE1Q9Y2F5 2266 aa24.04■■□□□ 1.44
VEGFA-208ENST00000417285 DOPEY1Q5JWR5 2465 aa24.04■■□□□ 1.44
VEGFA-208ENST00000417285 A0A0A6YYC8 382 aaPredicted RBP24.04■■□□□ 1.44
VEGFA-208ENST00000417285 I3L1I5 382 aaPredicted RBP24.04■■□□□ 1.44
VEGFA-208ENST00000417285 SEC31AO94979 1220 aaKnown RBP24.04■■□□□ 1.44
VEGFA-208ENST00000417285 SERPINA7P05543 415 aa24.04■■□□□ 1.44
VEGFA-208ENST00000417285 HIST1H2AGP0C0S8 130 aaPredicted RBP24.04■■□□□ 1.44
VEGFA-208ENST00000417285 ICAM2P13598 275 aa24.04■■□□□ 1.44
VEGFA-208ENST00000417285 HIST1H2ADP20671 130 aa24.04■■□□□ 1.44
VEGFA-208ENST00000417285 ITGA8P53708 1063 aa24.04■■□□□ 1.44
VEGFA-208ENST00000417285 CDKN2DP55273 166 aa24.04■■□□□ 1.44
VEGFA-208ENST00000417285 ZNF169Q14929 603 aaPredicted RBP24.04■■□□□ 1.44
VEGFA-208ENST00000417285 TEDDM1Q5T9Z0 273 aa24.04■■□□□ 1.44
VEGFA-208ENST00000417285 PAQR3Q6TCH7 311 aa24.04■■□□□ 1.44
VEGFA-208ENST00000417285 RIPOR1Q6ZS17 1223 aa24.04■■□□□ 1.44
VEGFA-208ENST00000417285 HIST1H2AHQ96KK5 128 aa24.04■■□□□ 1.44
VEGFA-208ENST00000417285 HIST1H2AJQ99878 128 aa24.04■■□□□ 1.44
VEGFA-208ENST00000417285 H2AFJQ9BTM1 129 aa24.04■■□□□ 1.44
VEGFA-208ENST00000417285 PLEKHB1Q9UF11 243 aaPredicted RBP24.04■■□□□ 1.44
VEGFA-208ENST00000417285 TEX264Q9Y6I9 313 aa24.04■■□□□ 1.44
VEGFA-208ENST00000417285 HEATR5BQ9P2D3 2071 aa24.03■■□□□ 1.44
VEGFA-208ENST00000417285 H0YIG0 161 aa24.03■■□□□ 1.44
VEGFA-208ENST00000417285 NDC80O14777 642 aa24.03■■□□□ 1.44
VEGFA-208ENST00000417285 COX6A1P12074 109 aa24.03■■□□□ 1.44
VEGFA-208ENST00000417285 PDAP1Q13442 181 aaKnown RBP24.03■■□□□ 1.44
VEGFA-208ENST00000417285 STEAP4Q687X5 459 aa24.03■■□□□ 1.44
VEGFA-208ENST00000417285 AGTRAPQ6RW13 159 aa24.03■■□□□ 1.44
VEGFA-208ENST00000417285 PLD3Q8IV08 490 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms