RNA–Protein interactions for RNA: ENST00000416690.5

GTF3C3-203, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 326 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-203ENST00000416690 TEX11Q8IYF3 940 aa0.75□□□□□ -2.29
GTF3C3-203ENST00000416690 UBQLNLQ8IYU4 475 aa0.75□□□□□ -2.29
GTF3C3-203ENST00000416690 SLC22A15Q8IZD6 547 aa0.75□□□□□ -2.29
GTF3C3-203ENST00000416690 TPRX1Q8N7U7 411 aa0.75□□□□□ -2.29
GTF3C3-203ENST00000416690 KCNE4Q8WWG9 221 aa0.75□□□□□ -2.29
GTF3C3-203ENST00000416690 POMGNT1Q8WZA1 660 aa0.75□□□□□ -2.29
GTF3C3-203ENST00000416690 PIK3R3Q92569 461 aa0.75□□□□□ -2.29
GTF3C3-203ENST00000416690 FRAT1Q92837 279 aaPredicted RBP0.75□□□□□ -2.29
GTF3C3-203ENST00000416690 LRRC59Q96AG4 307 aaKnown RBP0.75□□□□□ -2.29
GTF3C3-203ENST00000416690 NABP1Q96AH0 204 aa0.75□□□□□ -2.29
GTF3C3-203ENST00000416690 THOC1Q96FV9 657 aaKnown RBP0.75□□□□□ -2.29
GTF3C3-203ENST00000416690 STRADBQ9C0K7 418 aa0.75□□□□□ -2.29
GTF3C3-203ENST00000416690 EGLN3Q9H6Z9 239 aa0.75□□□□□ -2.29
GTF3C3-203ENST00000416690 DIAPH3Q9NSV4 1193 aa0.75□□□□□ -2.29
GTF3C3-203ENST00000416690 RSPH14Q9UHP6 348 aa0.75□□□□□ -2.29
GTF3C3-203ENST00000416690 SLC13A4Q9UKG4 626 aa0.75□□□□□ -2.29
GTF3C3-203ENST00000416690 TMED3Q9Y3Q3 217 aa0.75□□□□□ -2.29
GTF3C3-203ENST00000416690 SESN1Q9Y6P5 492 aa0.75□□□□□ -2.29
GTF3C3-203ENST00000416690 KAT6BQ8WYB5 2073 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 FCGBPQ9Y6R7 5405 aaPredicted RBP0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 PTCH1Q13635 1447 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 LOC105371045A0A1W2PR82 267 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 FEZF1A0PJY2 475 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 LIPT2A6NK58 231 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 SCO2O43819 266 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 WISP3O95389 354 aaPredicted RBP0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 APBB3O95704 486 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 PIGRP01833 764 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 CLEC3BP05452 202 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 HAPLN1P10915 354 aaPredicted RBP0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 RARGP13631 454 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 GPR183P32249 361 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 ACSL1P33121 698 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 SLC1A4P43007 532 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 IST1P53990 364 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 SIRPAP78324 504 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 PRAMEP78395 509 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 MLF2Q15773 248 aaPredicted RBP0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 TBCEQ15813 527 aaPredicted RBP0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 ZNF544Q6NX49 715 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 KLHL35Q6PF15 583 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 TMCO3Q6UWJ1 677 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 ARHGAP22Q7Z5H3 698 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 C5orf24Q7Z6I8 188 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 NAXDQ8IW45 347 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 NDUFAF2Q8N183 169 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 OR2L5Q8NG80 312 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 OR6T1Q8NGN1 323 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 OR10Q1Q8NGQ4 319 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 RPLP0P6Q8NHW5 317 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 ZNF564Q8TBZ8 553 aaPredicted RBP0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 AFAP1L1Q8TED9 768 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 STARD4Q96DR4 205 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 RRP36Q96EU6 259 aaKnown RBP0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 MAGEB18Q96M61 343 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 SIGLEC12Q96PQ1 595 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 SRSF8Q9BRL6 282 aaKnown RBP0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 MAK16Q9BXY0 300 aaKnown RBP0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 PLA2G12AQ9BZM1 189 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 SPATC1LQ9H0A9 340 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 ZMYND12Q9H0C1 365 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 SH2D4AQ9H788 454 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 TBC1D17Q9HA65 648 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 NTN4Q9HB63 628 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 WASH6PQ9NQA3 447 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 PILRAQ9UKJ1 303 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 RAB26Q9ULW5 256 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 ABCG2Q9UNQ0 655 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 RUSC2Q8N2Y8 1516 aa0.74□□□□□ -2.29
GTF3C3-203ENST00000416690 SALL1Q9NSC2 1324 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 TRAV9-2A0A087WT02 112 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 FRMD3A2A2Y4 597 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 RRN3P2A6NIE6 340 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 C2CD4DB7Z1M9 353 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 TSC22D2O75157 780 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 STAM2O75886 525 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 OR2C1O95371 312 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 IGHV2-70P01814 119 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 RPLP0P05388 317 aaKnown RBP0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 VDRP11473 427 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 VPREB1P12018 145 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 ATP1A3P13637 1013 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 GABRB1P18505 474 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 ALDH3A2P51648 485 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 VAMP7P51809 220 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 STX17P56962 302 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 TMF1P82094 1093 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 LRRC63Q05C16 580 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 TRAP1Q12931 704 aaKnown RBP0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 GSG1Q2KHT4 349 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 FAM106AQ4KMX7 169 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 ATP1A1-AS1Q5TC04 95 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 ZNF776Q68DI1 518 aaPredicted RBP0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 OR4A47Q6IF82 309 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 ZNF600Q6ZNG1 722 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 SLC24A5Q71RS6 500 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 MKXQ8IYA7 352 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 FBXO39Q8N4B4 442 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 ESX1Q8N693 406 aa0.73□□□□□ -2.29
GTF3C3-203ENST00000416690 TCEANCQ8N8B7 351 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms