RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 SLC26A3P40879 764 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 ELK3P41970 407 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 CARSP49589 748 aaKnown RBP14.35□□□□□ -0.11
UBXN4-203ENST00000416538 FASTKD3Q14CZ7 662 aaKnown RBP14.35□□□□□ -0.11
UBXN4-203ENST00000416538 TEDDM1Q5T9Z0 273 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 STEAP4Q687X5 459 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 HIBCHQ6NVY1 386 aaPredicted RBP14.35□□□□□ -0.11
UBXN4-203ENST00000416538 IGFL2Q6UWQ7 119 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 ADCK2Q7Z695 626 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 KLHL7Q8IXQ5 586 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 NACC2Q96BF6 587 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 MIEF2Q96C03 454 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 LINGO1Q96FE5 620 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 PDLIM2Q96JY6 352 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 PRAP1Q96NZ9 151 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 CCDC177Q9NQR7 707 aaPredicted RBP14.35□□□□□ -0.11
UBXN4-203ENST00000416538 C3orf18Q9UK00 162 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 VPS4AQ9UN37 437 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 PSAT1Q9Y617 370 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 ZNF839A8K0R7 811 aa14.34□□□□□ -0.11
UBXN4-203ENST00000416538 IDSB3KWA1 339 aa14.34□□□□□ -0.11
UBXN4-203ENST00000416538 TTI1O43156 1089 aa14.34□□□□□ -0.11
UBXN4-203ENST00000416538 ZBTB14O43829 449 aa14.34□□□□□ -0.11
UBXN4-203ENST00000416538 JRKO75564 520 aa14.34□□□□□ -0.11
UBXN4-203ENST00000416538 KLHL18O94889 574 aa14.34□□□□□ -0.11
UBXN4-203ENST00000416538 ALPPP05187 535 aa14.34□□□□□ -0.11
UBXN4-203ENST00000416538 ACPPP15309 386 aa14.34□□□□□ -0.11
UBXN4-203ENST00000416538 FDXRP22570 491 aa14.34□□□□□ -0.11
UBXN4-203ENST00000416538 CSNK1G2P78368 415 aa14.34□□□□□ -0.11
UBXN4-203ENST00000416538 ABATP80404 500 aa14.34□□□□□ -0.11
UBXN4-203ENST00000416538 RELAQ04206 551 aa14.34□□□□□ -0.11
UBXN4-203ENST00000416538 EEF1A2Q05639 463 aaKnown RBP14.34□□□□□ -0.11
UBXN4-203ENST00000416538 THEMIS2Q5TEJ8 643 aa14.34□□□□□ -0.11
UBXN4-203ENST00000416538 ATG9BQ674R7 924 aa14.34□□□□□ -0.11
UBXN4-203ENST00000416538 HIST2H2BCQ6DN03 193 aa14.34□□□□□ -0.11
UBXN4-203ENST00000416538 CISD2Q8N5K1 135 aaKnown RBP14.34□□□□□ -0.11
UBXN4-203ENST00000416538 MVB12AQ96EY5 273 aa14.34□□□□□ -0.11
UBXN4-203ENST00000416538 ATG10Q9H0Y0 220 aa14.34□□□□□ -0.11
UBXN4-203ENST00000416538 ZNF160Q9HCG1 818 aa14.34□□□□□ -0.11
UBXN4-203ENST00000416538 TRPC4Q9UBN4 977 aa14.34□□□□□ -0.11
UBXN4-203ENST00000416538 NOVA2Q9UNW9 492 aaKnown RBP14.34□□□□□ -0.11
UBXN4-203ENST00000416538 TEX264Q9Y6I9 313 aa14.34□□□□□ -0.11
UBXN4-203ENST00000416538 A0A1W2PQ72 361 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 MAP2K7O14733 419 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 SEC31AO94979 1220 aaKnown RBP14.33□□□□□ -0.12
UBXN4-203ENST00000416538 TTC4O95801 387 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 HPP00738 406 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 BCL6P41182 706 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 ITGA8P53708 1063 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 MRPS25P82663 173 aaKnown RBP14.33□□□□□ -0.12
UBXN4-203ENST00000416538 OCA2Q04671 838 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 SP140Q13342 867 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 MORF4L2Q15014 288 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 NR6A1Q15406 480 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 FAAH2Q6GMR7 532 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 AGTRAPQ6RW13 159 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 TMEM207Q6UWW9 146 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 KIAA0408Q6ZU52 694 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 GALNT7Q86SF2 657 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 IQCKQ8N0W5 287 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 OR9A4Q8NGU2 314 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 PPP4R1Q8TF05 950 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 PSMF1Q92530 271 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 MMABQ96EY8 250 aaPredicted RBP14.33□□□□□ -0.12
UBXN4-203ENST00000416538 THOC3Q96J01 351 aaKnown RBP14.33□□□□□ -0.12
UBXN4-203ENST00000416538 CCDC138Q96M89 665 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 OR4K3Q96R72 315 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 BARD1Q99728 777 aaKnown RBP14.33□□□□□ -0.12
UBXN4-203ENST00000416538 WDR77Q9BQA1 342 aaPredicted RBP14.33□□□□□ -0.12
UBXN4-203ENST00000416538 SGPP1Q9BX95 441 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 DRC3Q9H069 523 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 ILKAPQ9H0C8 392 aaPredicted RBP14.33□□□□□ -0.12
UBXN4-203ENST00000416538 SPNS1Q9H2V7 528 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 TAS2R13Q9NYV9 303 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 MAP10Q9P2G4 905 aa14.33□□□□□ -0.12
UBXN4-203ENST00000416538 IGHV1-45A0A0A0MS14 117 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 FEZF1A0PJY2 475 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 CTAGE15A4D2H0 777 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 E2F3O00716 465 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 LCMT2O60294 686 aaKnown RBP14.32□□□□□ -0.12
UBXN4-203ENST00000416538 IPO13O94829 963 aaKnown RBP14.32□□□□□ -0.12
UBXN4-203ENST00000416538 C8GP07360 202 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 CDH1P12830 882 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 IL1RNP18510 177 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 GNG11P61952 73 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 DR1Q01658 176 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 NAE1Q13564 534 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 PCOLCEQ15113 449 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 EIF2S3LQ2VIR3 472 aaKnown RBP14.32□□□□□ -0.12
UBXN4-203ENST00000416538 HECTD2Q5U5R9 776 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 GARNL3Q5VVW2 1013 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 SBSNQ6UWP8 590 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 CTAGE6Q86UF2 777 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 PDSS2Q86YH6 399 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 ANKMY2Q8IV38 441 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 GPATCH11Q8N954 259 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 ZCCHC10Q8TBK6 192 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 RERGQ96A58 199 aaPredicted RBP14.32□□□□□ -0.12
UBXN4-203ENST00000416538 PYCR2Q96C36 320 aa14.32□□□□□ -0.12
UBXN4-203ENST00000416538 NAT9Q9BTE0 207 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms