RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 ARHGEF39Q8N4T4 335 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 AMER3Q8N944 861 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 PRR7Q8TB68 274 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 THAP11Q96EK4 314 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 NDNQ99608 321 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 PARVBQ9HBI1 364 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 ZNF160Q9HCG1 818 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 PDE10AQ9Y233 779 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 HIVEP3Q5T1R4 2406 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 USP9YO00507 2555 aaPredicted RBP16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 KCNE1BA0A087WTH5 132 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 NSG1A0A0A6YYJ2 146 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 A0A1W2PQ72 361 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 P2RX6O15547 441 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 SEMA7AO75326 666 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 BANF1O75531 89 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 DDAH2O95865 285 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 AHSGP02765 367 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 HIST1H2AGP0C0S8 130 aaPredicted RBP16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 HIST1H2ADP20671 130 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 FDXRP22570 491 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 CCND1P24385 295 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 IVDP26440 423 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 TSFMP43897 325 aaKnown RBP16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 AVPR1BP47901 424 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 RPS15AP62244 130 aaKnown RBP16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 MSS51Q4VC12 460 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 AGTRAPQ6RW13 159 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 PAQR3Q6TCH7 311 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 SYDE1Q6ZW31 735 aaPredicted RBP16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 GALNT7Q86SF2 657 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 KBTBD2Q8IY47 623 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 PDIK1LQ8N165 341 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 C8orf44Q96CB5 159 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 CERS2Q96G23 380 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 HIST1H2AHQ96KK5 128 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 RUNDC3BQ96NL0 473 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 BARD1Q99728 777 aaKnown RBP16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 HIST1H2AJQ99878 128 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 H2AFJQ9BTM1 129 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 AGPAT4Q9NRZ5 378 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 ADAMTS6Q9UKP5 1117 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 NOVA2Q9UNW9 492 aaKnown RBP16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 CSAG2Q9Y5P2 127 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 COL12A1Q99715 3063 aa16.7■□□□□ 0.26
PDLIM2-208ENST00000416159 FFAR3O14843 346 aa16.69■□□□□ 0.26
PDLIM2-208ENST00000416159 GPR42O15529 346 aa16.69■□□□□ 0.26
PDLIM2-208ENST00000416159 COX6A1P12074 109 aa16.69■□□□□ 0.26
PDLIM2-208ENST00000416159 TBPL1P62380 186 aa16.69■□□□□ 0.26
PDLIM2-208ENST00000416159 CSNK1G2P78368 415 aa16.69■□□□□ 0.26
PDLIM2-208ENST00000416159 MFAP5Q13361 173 aa16.69■□□□□ 0.26
PDLIM2-208ENST00000416159 ELOAQ14241 798 aaKnown RBP16.69■□□□□ 0.26
PDLIM2-208ENST00000416159 ZNF169Q14929 603 aaPredicted RBP16.69■□□□□ 0.26
PDLIM2-208ENST00000416159 MORF4L2Q15014 288 aa16.69■□□□□ 0.26
PDLIM2-208ENST00000416159 TLR1Q15399 786 aa16.69■□□□□ 0.26
PDLIM2-208ENST00000416159 RBM20Q5T481 1227 aaKnown RBP16.69■□□□□ 0.26
PDLIM2-208ENST00000416159 TEDDM1Q5T9Z0 273 aa16.69■□□□□ 0.26
PDLIM2-208ENST00000416159 B3GNTL1Q67FW5 361 aaPredicted RBP16.69■□□□□ 0.26
PDLIM2-208ENST00000416159 C17orf64Q86WR6 236 aa16.69■□□□□ 0.26
PDLIM2-208ENST00000416159 LINGO1Q96FE5 620 aa16.69■□□□□ 0.26
PDLIM2-208ENST00000416159 CNDP1Q96KN2 507 aa16.69■□□□□ 0.26
PDLIM2-208ENST00000416159 MESP1Q9BRJ9 268 aa16.69■□□□□ 0.26
PDLIM2-208ENST00000416159 KCNF1Q9H3M0 494 aa16.69■□□□□ 0.26
PDLIM2-208ENST00000416159 SPTAN1Q13813 2472 aaKnown RBP16.69■□□□□ 0.26
PDLIM2-208ENST00000416159 LOC102723996A0A087X1L8 192 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 IGHV1-45A0A0A0MS14 117 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 ANKUB1A6NFN9 424 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 H0YIG0 161 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 KLHL18O94889 574 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 NSA2O95478 260 aaKnown RBP16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 SERPINA7P05543 415 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 GRK3P35626 688 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 CDKN2DP55273 166 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 IL2P60568 153 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 EEF1A2Q05639 463 aaKnown RBP16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 NAE1Q13564 534 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 SYT16Q17RD7 645 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 FAAH2Q6GMR7 532 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 LCTLQ6UWM7 567 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 LINC00696Q6ZRV3 163 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 RIPOR1Q6ZS17 1223 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 VN1R4Q7Z5H5 301 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 IGDCC3Q8IVU1 814 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 CAMKVQ8NCB2 501 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 LRRC39Q96DD0 335 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 TRIM54Q9BYV2 358 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 FAM129AQ9BZQ8 928 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 ATG10Q9H0Y0 220 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 PPANQ9NQ55 473 aaKnown RBP16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 RIC8BQ9NVN3 520 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 MKL2Q9ULH7 1088 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 CORO1CQ9ULV4 474 aaPredicted RBP16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 NTNG1Q9Y2I2 539 aa16.68■□□□□ 0.26
PDLIM2-208ENST00000416159 SPENQ96T58 3664 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 PABPN1LA6NDY0 278 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 WFS1O76024 890 aa16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 BMP10O95393 424 aa16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 CYC1P08574 325 aa16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 PRR35P0CG20 571 aa16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 ICAM2P13598 275 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms