RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 CMPK1P30085 196 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 RPA3P35244 121 aaPredicted RBP12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 SOX11P35716 441 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 SLC1A2P43004 574 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 CA7P43166 264 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 RGS4P49798 205 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 TNFSF10P50591 281 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 GRB7Q14451 532 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 GRM7Q14831 915 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 CRYMQ14894 314 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 NAA25Q14CX7 972 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 INAQ16352 499 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 HP1BP3Q5SSJ5 553 aaPredicted RBP12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 YOD1Q5VVQ6 348 aaPredicted RBP12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 FIGLAQ6QHK4 219 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 TMEM207Q6UWW9 146 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 NEK10Q6ZWH5 1172 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 MAATS1Q7Z4T9 603 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 KBTBD2Q8IY47 623 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 SIRT6Q8N6T7 355 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 BBOF1Q8ND07 529 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 BRIX1Q8TDN6 353 aaKnown RBP12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 PSMF1Q92530 271 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 KCNJ9Q92806 393 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 CFAP36Q96G28 342 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 SNF8Q96H20 258 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 SELENOSQ9BQE4 189 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 MENTQ9BUN1 341 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 TAS2R13Q9NYV9 303 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 SPATA7Q9P0W8 599 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 GALPQ9UBC7 116 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 TRMT6Q9UJA5 497 aaKnown RBP12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 DHRS7Q9Y394 339 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 SVILO95425 2214 aa12.58□□□□□ -0.39
CTHRC1-202ENST00000415886 F8P00451 2351 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 C2CD3Q4AC94 2353 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 TRAV17A0A0B4J275 112 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 SRPX2O60687 465 aaPredicted RBP12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 CELA2AP08217 269 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 PRR35P0CG20 571 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 MPC1LP0DKB6 136 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 ELK3P41970 407 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 CLCN7P51798 805 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 ITGA8P53708 1063 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 MPP1Q00013 466 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 CALCOCO2Q13137 446 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 CUL1Q13616 776 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 ARHGAP19Q14CB8 494 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 CCSMST1Q4G0I0 132 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 VWA2Q5GFL6 755 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 TCTE1Q5JU00 501 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 LRRC8EQ6NSJ5 796 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 ZNF295-AS1Q8N0V1 137 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 HMGCLL1Q8TB92 370 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 STT3BQ8TCJ2 826 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 MCOLN3Q8TDD5 553 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 SMPDL3AQ92484 453 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 LRRC39Q96DD0 335 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 ZNF285Q96NJ3 590 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 GPR21Q99679 349 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 MIPEPQ99797 713 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 ABCF3Q9NUQ8 709 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 C3orf18Q9UK00 162 aa12.58□□□□□ -0.4
CTHRC1-202ENST00000415886 NSG1A0A0A6YYJ2 146 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 FITM1A5D6W6 292 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 NRP2O60462 931 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 CTSVO60911 334 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 PSIP1O75475 530 aaKnown RBP12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 BANF1O75531 89 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 F7P08709 466 aaPredicted RBP12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 HIST1H2AGP0C0S8 130 aaPredicted RBP12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 ZGLP1P0C6A0 271 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 COX6A1P12074 109 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 HIST1H2ADP20671 130 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 PNLIPRP1P54315 467 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 VSX2P58304 361 aaPredicted RBP12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 OCA2Q04671 838 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 EEF1A2Q05639 463 aaKnown RBP12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 FAM214AQ32MH5 1076 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 MSS51Q4VC12 460 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 THEMIS2Q5TEJ8 643 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 ATG9BQ674R7 924 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 FRMPD2BQ6IN97 320 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 HIBCHQ6NVY1 386 aaPredicted RBP12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 ZNF549Q6P9A3 640 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 RPTNQ6XPR3 784 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 KIAA0408Q6ZU52 694 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 AGGF1Q8N302 714 aaeCLIP12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 C2CD4AQ8NCU7 369 aaPredicted RBP12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 HAS2Q92819 552 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 MIEF2Q96C03 454 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 CERS2Q96G23 380 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 HIST1H2AHQ96KK5 128 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 PKP4Q99569 1192 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 HIST1H2AJQ99878 128 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 TRIM51Q9BSJ1 452 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 AARSD1Q9BTE6 412 aaKnown RBP12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 H2AFJQ9BTM1 129 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 ACAT2Q9BWD1 397 aa12.57□□□□□ -0.4
CTHRC1-202ENST00000415886 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms