RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 SH3PXD2AQ5TCZ1 1133 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 OVCH2Q7RTZ1 564 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 ADAM32Q8TC27 787 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 TRMT61AQ96FX7 289 aaKnown RBP19.78■□□□□ 0.76
AP1S3-205ENST00000415298 ZBTB18Q99592 522 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 MRPL47Q9HD33 250 aaKnown RBP19.78■□□□□ 0.76
AP1S3-205ENST00000415298 BABAM2Q9NXR7 383 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 GPN3Q9UHW5 284 aaPredicted RBP19.78■□□□□ 0.76
AP1S3-205ENST00000415298 KCNK7Q9Y2U2 307 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 EFCAB7A8K855 629 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 PLIN3O60664 434 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 HERVK_113P63132 956 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 STX5Q13190 355 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 N4BP2L1Q5TBK1 243 aaPredicted RBP19.78■□□□□ 0.76
AP1S3-205ENST00000415298 TRIM48Q8IWZ4 208 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 RHOT1Q8IXI2 618 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 RDH10Q8IZV5 341 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 FAM129BQ96TA1 746 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 TFB2MQ9H5Q4 396 aaKnown RBP19.78■□□□□ 0.76
AP1S3-205ENST00000415298 CAB39LQ9H9S4 337 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.78■□□□□ 0.76
AP1S3-205ENST00000415298 UFSP2Q9NUQ7 469 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 IRAK3Q9Y616 596 aa19.78■□□□□ 0.76
AP1S3-205ENST00000415298 PCDH17O14917 1159 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 IFNA7P01567 189 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 RAF1P04049 648 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 IFNA4P05014 189 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 TGFBR1P36897 503 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 RAB30Q15771 203 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 TCTE1Q5JU00 501 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 CES5AQ6NT32 575 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 BHLHA9Q7RTU4 235 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 VWA5B2Q8N398 1253 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 OR51M1Q9H341 326 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 SMOC2Q9H3U7 446 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 WDR55Q9H6Y2 383 aaPredicted RBP19.77■□□□□ 0.76
AP1S3-205ENST00000415298 ABCG2Q9UNQ0 655 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 LYVE1Q9Y5Y7 322 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 SESN1Q9Y6P5 492 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 TRBV23-1A0A0A0MS06 115 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 MFSD2BA6NFX1 497 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 CLDN24A6NM45 220 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 DHFRP00374 187 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 TFE3P19532 575 aaPredicted RBP19.77■□□□□ 0.76
AP1S3-205ENST00000415298 DAOAP59103 153 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 GABREP78334 506 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 ADGRD2Q7Z7M1 963 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 REPS1Q96D71 796 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 TRNT1Q96Q11 434 aaKnown RBP19.77■□□□□ 0.76
AP1S3-205ENST00000415298 C19orf43Q9BQ61 176 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 ZCCHC2Q9C0B9 1178 aaKnown RBP19.77■□□□□ 0.76
AP1S3-205ENST00000415298 ZDHHC4Q9NPG8 344 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 CHRAC1Q9NRG0 131 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 EXD2Q9NVH0 621 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 ABCD2Q9UBJ2 740 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 USP3Q9Y6I4 520 aa19.77■□□□□ 0.76
AP1S3-205ENST00000415298 SLC22A23A1A5C7 686 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 H7C2Y5 167 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 IL1R2P27930 398 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 TBX4P57082 545 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 ZIK1Q3SY52 487 aaPredicted RBP19.76■□□□□ 0.75
AP1S3-205ENST00000415298 TPGS2Q68CL5 300 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 LILRA6Q6PI73 481 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 KIAA1191Q96A73 305 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 TIFAQ96CG3 184 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 TUBGCP3Q96CW5 907 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 TNKS2Q9H2K2 1166 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 MLXQ9UH92 298 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 INTS6Q9UL03 887 aaKnown RBP19.76■□□□□ 0.75
AP1S3-205ENST00000415298 CLEC4AQ9UMR7 237 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 VPS9D1Q9Y2B5 631 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 TEX264Q9Y6I9 313 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 SPTBN5Q9NRC6 3674 aaKnown RBP19.76■□□□□ 0.75
AP1S3-205ENST00000415298 PLXNA3P51805 1871 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 hCG_1807616A0A1W2PRN6 198 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 CXorf49A8MYA2 514 aaPredicted RBP19.76■□□□□ 0.75
AP1S3-205ENST00000415298 PTGES3LE9PB15 166 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 PRRG1O14668 218 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 GLRA3O75311 464 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 TMEM63AO94886 807 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 HSPA4LO95757 839 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 PLATP00750 562 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 ACSM4P0C7M7 580 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 RIDAP52758 137 aaKnown RBP19.76■□□□□ 0.75
AP1S3-205ENST00000415298 PITX1P78337 314 aaPredicted RBP19.76■□□□□ 0.75
AP1S3-205ENST00000415298 MLLT1Q03111 559 aaPredicted RBP19.76■□□□□ 0.75
AP1S3-205ENST00000415298 GPR158Q5T848 1215 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 SYPL2Q5VXT5 272 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 C2orf15Q8WU43 125 aaKnown RBP19.76■□□□□ 0.75
AP1S3-205ENST00000415298 RXFP2Q8WXD0 754 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 EDEM1Q92611 657 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 USP7Q93009 1102 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 MYRFLQ96LU7 910 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 ERVK13-1Q9NX77 482 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 MGAT4BQ9UQ53 548 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 USTQ9Y2C2 406 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 ZNF638Q14966 1978 aaKnown RBP19.76■□□□□ 0.75
AP1S3-205ENST00000415298 DOCK6Q96HP0 2047 aa19.76■□□□□ 0.75
AP1S3-205ENST00000415298 UNC80Q8N2C7 3258 aa19.75■□□□□ 0.75
AP1S3-205ENST00000415298 A0A0B4J293 547 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms