RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 KIR3DL1P43629 444 aa12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 SERPINB8P50452 374 aa12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 PLOD1Q02809 727 aaPredicted RBP12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 RBPJQ06330 500 aa12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 TMED2Q15363 201 aa12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 CYP2A13Q16696 494 aa12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 INSCQ1MX18 579 aa12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 TTLL9Q3SXZ7 439 aa12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 HECTD2Q5U5R9 776 aa12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 ADGRG6Q86SQ4 1221 aa12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 ACBD4Q8NC06 268 aa12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 ACMSDQ8TDX5 336 aa12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 BIRC8Q96P09 236 aa12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 ENKD1Q9H0I2 346 aa12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 OR2AG1Q9H205 316 aa12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 SLC17A6Q9P2U8 582 aa12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 SLC39A10Q9ULF5 831 aa12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 BTRCQ9Y297 605 aa12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 MTO1Q9Y2Z2 717 aaKnown RBP12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 PCDHGB6Q9Y5F9 930 aa12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 CSPG4Q6UVK1 2322 aa12.99□□□□□ -0.33
RAPGEF1-204ENST00000414781 C17orf113A0A1B0GUU1 675 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 TRIM49D1C9J1S8 452 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 KMOO15229 486 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 GPR39O43194 453 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 HBQ1P09105 142 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 VCLP18206 1134 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 CYP2A7P20853 494 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 SLC26A3P40879 764 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 FOLR3P41439 243 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 RAB10P61026 200 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 Q0VFX4 171 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 BCL7AQ4VC05 210 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 ZNF789Q5FWF6 425 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 AGBL2Q5U5Z8 902 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 TMEM220Q6QAJ8 160 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 RAPH1Q70E73 1250 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 LCA5Q86VQ0 697 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 CLDN19Q8N6F1 224 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 RASGEF1AQ8N9B8 481 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 NACC2Q96BF6 587 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 ALKBH8Q96BT7 664 aaKnown RBP12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 TIMM29Q9BSF4 260 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 CCM2Q9BSQ5 444 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 SLC7A5P2Q9GIP4 190 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 TMBIM4Q9HC24 238 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 MED4Q9NPJ6 270 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 SOHLH2Q9NX45 425 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 EURLQ9NYK6 297 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 ATXN10Q9UBB4 475 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 ACTL7BQ9Y614 415 aa12.98□□□□□ -0.33
RAPGEF1-204ENST00000414781 PIKFYVEQ9Y2I7 2098 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 A0A087X1B8 175 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 OR52A4PA6NMU1 304 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 HMGB1P1B2RPK0 211 aaPredicted RBP12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 AGPSO00116 658 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 CHUKO15111 745 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 MTX2O75431 263 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 SASH3O75995 380 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 COL6A2P12110 1019 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 SAT1P21673 171 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 IDSP22304 550 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 CCT5P48643 541 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 PRLHRP49683 370 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 LTBQ06643 244 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 ABRQ12979 859 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 PDAP1Q13442 181 aaKnown RBP12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 SEPT7Q16181 437 aaKnown RBP12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 PTCHD3Q3KNS1 767 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 LRRC8EQ6NSJ5 796 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 ZNF549Q6P9A3 640 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 OTOAQ7RTW8 1153 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 LRRTM4Q86VH4 590 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 TRAPPC5Q8IUR0 188 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 ASZ1Q8WWH4 475 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 ISL2Q96A47 359 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 LINC00615Q96LM1 132 aaPredicted RBP12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 TSNARE1Q96NA8 513 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 SMC6Q96SB8 1091 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 NDNQ99608 321 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 SH3GL2Q99962 352 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 TREX2Q9BQ50 279 aaPredicted RBP12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 GSX1Q9H4S2 264 aaPredicted RBP12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 GPN3Q9UHW5 284 aaPredicted RBP12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 TRMT6Q9UJA5 497 aaKnown RBP12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 ACOT9Q9Y305 439 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 DHRS7Q9Y394 339 aa12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 MAP1AP78559 2803 aaPredicted RBP12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 MDC1Q14676 2089 aaKnown RBP12.97□□□□□ -0.33
RAPGEF1-204ENST00000414781 NSD1Q96L73 2696 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-204ENST00000414781 ABCA4P78363 2273 aa12.96□□□□□ -0.33
RAPGEF1-204ENST00000414781 OR5K3A6NET4 321 aa12.96□□□□□ -0.33
RAPGEF1-204ENST00000414781 SLC9B1P1A6NJY1 282 aa12.96□□□□□ -0.33
RAPGEF1-204ENST00000414781 MASP2O00187 686 aa12.96□□□□□ -0.33
RAPGEF1-204ENST00000414781 EIF3FO00303 357 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-204ENST00000414781 UNC5CO95185 931 aa12.96□□□□□ -0.33
RAPGEF1-204ENST00000414781 APOA4P06727 396 aa12.96□□□□□ -0.33
RAPGEF1-204ENST00000414781 MSL3P1P0C860 447 aa12.96□□□□□ -0.33
RAPGEF1-204ENST00000414781 CBSLP0DN79 551 aa12.96□□□□□ -0.33
RAPGEF1-204ENST00000414781 ESRRAP11474 423 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms