RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 SNRPD1P62314 119 aaKnown RBP3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 RASGEF1BQ0VAM2 473 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 TRAP1Q12931 704 aaKnown RBP3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 FCN2Q15485 313 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 GPR33Q49SQ1 333 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 LACTB2Q53H82 288 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 ZC2HC1BQ5TFG8 222 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 LYSMD4Q5XG99 296 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 BHLHB9Q6PI77 547 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 FIP1L1Q6UN15 594 aaKnown RBP3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 IL27RAQ6UWB1 636 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 Q6ZSR9 355 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 ANKRD33Q7Z3H0 272 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 ZNF248Q8NDW4 579 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 OCC1Q8TAD7 63 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 GATAD1Q8WUU5 269 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 APOBEC4Q8WW27 367 aaKnown RBP3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 SEPT1Q8WYJ6 367 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 P2RX5Q93086 422 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 WBP2Q969T9 261 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 AZIN2Q96A70 460 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 ART5Q96L15 291 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 KRT12Q99456 494 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 MGME1Q9BQP7 344 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 ZDHHC18Q9NUE0 388 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 PLCXD1Q9NUJ7 323 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 RASAL2Q9UJF2 1139 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 WDR37Q9Y2I8 494 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 PPP2R2CQ9Y2T4 447 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 CCDC141Q6ZP82 1450 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 PRDM15P57071 1507 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 LAMC1P11047 1609 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 TET3O43151 1660 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 IQGAP1P46940 1657 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 ZC3H13Q5T200 1668 aaKnown RBP3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 KIAA1210Q9ULL0 1709 aa3.32□□□□□ -1.88
HMGB1P11-201ENST00000413899 HECW2Q9P2P5 1572 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 ARHGAP5Q13017 1502 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 RPRD2Q5VT52 1461 aaKnown RBP3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 HEG1Q9ULI3 1381 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 IL16Q14005 1332 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 C15orf61A6NNL5 157 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 H0YAE9 185 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 EXTL3O43909 919 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 LUC7L3O95232 432 aaKnown RBP3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 SEC24AO95486 1093 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 SLC2A2P11168 524 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 SCG2P13521 617 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 TCF4P15884 667 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 TYMPP19971 482 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 GP5P40197 560 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 RGS7P49802 495 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 GMPSP49915 693 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 MFAP3P55082 362 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 ERVK11-1P61568 191 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 SP3Q02447 781 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 CACNG1Q06432 222 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 HNRNPDQ14103 355 aaKnown RBP3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 TMEM187Q14656 261 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 EXT1Q16394 746 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 ZNF74Q16587 644 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 TRAT1Q6PIZ9 186 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 MOXD1Q6UVY6 613 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 LEKR1Q6ZMV7 388 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 BTN2A1Q7KYR7 527 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 DNAJB7Q7Z6W7 309 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 TIGD4Q8IY51 512 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 THNSL1Q8IYQ7 743 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 RAB42Q8N4Z0 105 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 RAD54LQ92698 747 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 SIPA1Q96FS4 1042 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 ERO1AQ96HE7 468 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 MAGED4Q96JG8 741 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 ZMAT2Q96NC0 199 aaKnown RBP3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 LPAR4Q99677 370 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 NKX3-1Q99801 234 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 OPRPNQ99935 248 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 PIGQQ9BRB3 760 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 KATNB1Q9BVA0 655 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 SDCBP2Q9H190 292 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 ZCCHC17Q9NP64 241 aaKnown RBP3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 ERAP1Q9NZ08 941 aa3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 KLHL8Q9P2G9 620 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P11-201ENST00000413899 MYOM1P52179 1685 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 CLTCL1P53675 1640 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 MADDQ8WXG6 1647 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 DIP2BQ9P265 1576 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 ATP7AQ04656 1500 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 FAM135AQ9P2D6 1515 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 WDR7Q9Y4E6 1490 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 NCOA1Q15788 1441 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 C9orf84Q5VXU9 1444 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 HTR3EA5X5Y0 456 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 TEX28O15482 410 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 ARHGEF9O43307 516 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 BAG3O95817 575 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 LHCGRP22888 699 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 CDX1P47902 265 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 VEGFCP49767 419 aa3.3□□□□□ -1.88
HMGB1P11-201ENST00000413899 LUMP51884 338 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms