RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 FEZF1A0PJY2 475 aa14.11□□□□□ -0.15
LIMS4-201ENST00000413601 PHGDHO43175 533 aaKnown RBP14.11□□□□□ -0.15
LIMS4-201ENST00000413601 SUV39H1O43463 412 aa14.11□□□□□ -0.15
LIMS4-201ENST00000413601 WISP3O95389 354 aaPredicted RBP14.11□□□□□ -0.15
LIMS4-201ENST00000413601 STX2P32856 288 aa14.11□□□□□ -0.15
LIMS4-201ENST00000413601 RPS15AP62244 130 aaKnown RBP14.11□□□□□ -0.15
LIMS4-201ENST00000413601 EFTUD2Q15029 972 aaKnown RBP eCLIP14.11□□□□□ -0.15
LIMS4-201ENST00000413601 TCTN3Q6NUS6 607 aa14.11□□□□□ -0.15
LIMS4-201ENST00000413601 PRMT9Q6P2P2 845 aa14.11□□□□□ -0.15
LIMS4-201ENST00000413601 MED25Q71SY5 747 aa14.11□□□□□ -0.15
LIMS4-201ENST00000413601 PPP1R32Q7Z5V6 425 aa14.11□□□□□ -0.15
LIMS4-201ENST00000413601 SPATA6LQ8N4H0 392 aa14.11□□□□□ -0.15
LIMS4-201ENST00000413601 ARHGEF39Q8N4T4 335 aa14.11□□□□□ -0.15
LIMS4-201ENST00000413601 ATL1Q8WXF7 558 aa14.11□□□□□ -0.15
LIMS4-201ENST00000413601 TRIM44Q96DX7 344 aaPredicted RBP14.11□□□□□ -0.15
LIMS4-201ENST00000413601 TSPAN17Q96FV3 270 aa14.11□□□□□ -0.15
LIMS4-201ENST00000413601 IP6K3Q96PC2 410 aa14.11□□□□□ -0.15
LIMS4-201ENST00000413601 SPSB2Q99619 263 aa14.11□□□□□ -0.15
LIMS4-201ENST00000413601 MACROD1Q9BQ69 325 aa14.11□□□□□ -0.15
LIMS4-201ENST00000413601 HAUS8Q9BT25 410 aa14.11□□□□□ -0.15
LIMS4-201ENST00000413601 SLC26A1Q9H2B4 701 aa14.11□□□□□ -0.15
LIMS4-201ENST00000413601 SOX17Q9H6I2 414 aaPredicted RBP14.11□□□□□ -0.15
LIMS4-201ENST00000413601 KCNE1BA0A087WTH5 132 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 CTAGE15A4D2H0 777 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 A6NL46 340 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 TXNDC9O14530 226 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 LCMT2O60294 686 aaKnown RBP14.1□□□□□ -0.15
LIMS4-201ENST00000413601 PDGFAP04085 211 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 CTAGE8P0CG41 777 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 CCDC166P0CW27 439 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 STMN1P16949 149 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 FBLP22087 321 aaKnown RBP14.1□□□□□ -0.15
LIMS4-201ENST00000413601 SPRP35270 261 aaPredicted RBP14.1□□□□□ -0.15
LIMS4-201ENST00000413601 RRADP55042 308 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 SNRPNP63162 240 aaKnown RBP14.1□□□□□ -0.15
LIMS4-201ENST00000413601 MEF2AQ02078 507 aaPredicted RBP14.1□□□□□ -0.15
LIMS4-201ENST00000413601 TSNQ15631 228 aaKnown RBP14.1□□□□□ -0.15
LIMS4-201ENST00000413601 COLEC12Q5KU26 742 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 GRTP1Q5TC63 336 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 ASB18Q6ZVZ8 466 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 FRA10AC1Q70Z53 315 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 VN1R4Q7Z5H5 301 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 CTAGE6Q86UF2 777 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 CTAGE4Q8IX94 777 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 TMEM102Q8N9M5 508 aaPredicted RBP14.1□□□□□ -0.15
LIMS4-201ENST00000413601 KIF18AQ8NI77 898 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 MMABQ96EY8 250 aaPredicted RBP14.1□□□□□ -0.15
LIMS4-201ENST00000413601 EGFL8Q99944 293 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 SLC25A23Q9BV35 468 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 DERL2Q9GZP9 239 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 P4HTMQ9NXG6 502 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 ZNF282Q9UDV7 671 aaPredicted RBP14.1□□□□□ -0.15
LIMS4-201ENST00000413601 CDC14AQ9UNH5 594 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 MRPS2Q9Y399 296 aaKnown RBP14.1□□□□□ -0.15
LIMS4-201ENST00000413601 OARD1Q9Y530 152 aa14.1□□□□□ -0.15
LIMS4-201ENST00000413601 TLN1Q9Y490 2541 aaKnown RBP14.09□□□□□ -0.15
LIMS4-201ENST00000413601 A0A0A6YYC8 382 aaPredicted RBP14.09□□□□□ -0.15
LIMS4-201ENST00000413601 VSTM2BA6NLU5 285 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 PYCARD-AS1I3L0S3 204 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 I3L1I5 382 aaPredicted RBP14.09□□□□□ -0.15
LIMS4-201ENST00000413601 MASP2O00187 686 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 PEX12O00623 359 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 FFAR3O14843 346 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 GPR42O15529 346 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 FOXS1O43638 330 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 ANXA5P08758 320 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 GRK3P35626 688 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 GMPRP36959 345 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 BCL6P41182 706 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 CCR8P51685 355 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 RAB10P61026 200 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 CDKL1Q00532 357 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 OCA2Q04671 838 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 C18orf21Q32NC0 220 aaPredicted RBP14.09□□□□□ -0.15
LIMS4-201ENST00000413601 CATSPEREQ5SY80 951 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 UBAP2Q5T6F2 1119 aaKnown RBP14.09□□□□□ -0.15
LIMS4-201ENST00000413601 GARNL3Q5VVW2 1013 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 ADAMTSL2Q86TH1 951 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 THOC6Q86W42 341 aaKnown RBP14.09□□□□□ -0.15
LIMS4-201ENST00000413601 PRSS58Q8IYP2 241 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 ABHD11Q8NFV4 315 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 STT3BQ8TCJ2 826 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 IFT81Q8WYA0 676 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 NEIL2Q969S2 332 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 MRRFQ96E11 262 aaKnown RBP14.09□□□□□ -0.15
LIMS4-201ENST00000413601 THAP11Q96EK4 314 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 MVB12AQ96EY5 273 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 TSNARE1Q96NA8 513 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 YIPF2Q9BWQ6 316 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 DRC3Q9H069 523 aa14.09□□□□□ -0.15
LIMS4-201ENST00000413601 MTRF1LQ9UGC7 380 aaKnown RBP14.09□□□□□ -0.15
LIMS4-201ENST00000413601 NXT1Q9UKK6 140 aaKnown RBP14.09□□□□□ -0.15
LIMS4-201ENST00000413601 PCDHGA9Q9Y5G4 932 aaKnown RBP14.09□□□□□ -0.15
LIMS4-201ENST00000413601 NCF1BA6NI72 391 aaPredicted RBP14.08□□□□□ -0.16
LIMS4-201ENST00000413601 NCF1CA8MVU1 366 aaPredicted RBP14.08□□□□□ -0.16
LIMS4-201ENST00000413601 J3QKU1 62 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 AGPSO00116 658 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 CEACAM4O75871 244 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 ZGLP1P0C6A0 271 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 NCF1P14598 390 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms