RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 PAGE3Q5JUK9 113 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 KIAA1614Q5VZ46 1190 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 CWF19L1Q69YN2 538 aaKnown RBP9.35□□□□□ -0.91
SMPD4-203ENST00000412570 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.35□□□□□ -0.913e-6■■■■■ 34.1
SMPD4-203ENST00000412570 CLIP3Q96DZ5 547 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 TRMOQ9BU70 441 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 SYNPO2LQ9H987 977 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 NDOR1Q9UHB4 597 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 FAM186AA6NE01 2351 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 CCDC154A6NI56 674 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 ZW10O43264 779 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 MTHFD1P11586 935 aaKnown RBP9.35□□□□□ -0.91
SMPD4-203ENST00000412570 F3P13726 295 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 IL1RNP18510 177 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 RABIFP47224 123 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 HIST2H2ACQ16777 129 aaPredicted RBP9.35□□□□□ -0.91
SMPD4-203ENST00000412570 HIST2H2AA3Q6FI13 130 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 ARMC6Q6NXE6 501 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 MED27Q6P2C8 311 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 RETREG3Q86VR2 466 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 NRROSQ86YC3 692 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.35□□□□□ -0.91
SMPD4-203ENST00000412570 DSELQ8IZU8 1212 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 OR8K5Q8NH50 307 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 ATL1Q8WXF7 558 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 EXOSC8Q96B26 276 aaKnown RBP9.35□□□□□ -0.91
SMPD4-203ENST00000412570 CMTM5Q96DZ9 223 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 AHCYL2Q96HN2 611 aaKnown RBP9.35□□□□□ -0.91
SMPD4-203ENST00000412570 BTBD10Q9BSF8 475 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 WDR41Q9HAD4 459 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 MEAF6Q9HAF1 191 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 SCML1Q9UN30 329 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 HAT1O14929 419 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 GSC2O15499 205 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 HRO43593 1189 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 SLC22A3O75751 556 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 BCKDHAP12694 445 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 PSMA3P25788 255 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 PPP1R8Q12972 351 aaKnown RBP9.35□□□□□ -0.91
SMPD4-203ENST00000412570 ZNF621Q6ZSS3 439 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 LPCAT2Q7L5N7 544 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 LCA5Q86VQ0 697 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 FUNDC1Q8IVP5 155 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 CLECL1Q8IZS7 167 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 FBXL8Q96CD0 374 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 ACTR5Q9H9F9 607 aaPredicted RBP9.35□□□□□ -0.91
SMPD4-203ENST00000412570 ACSL6Q9UKU0 697 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 HEATR5BQ9P2D3 2071 aa9.35□□□□□ -0.91
SMPD4-203ENST00000412570 ERI3O43414 337 aaKnown RBP9.34□□□□□ -0.91
SMPD4-203ENST00000412570 PRKNO60260 465 aaPredicted RBP9.34□□□□□ -0.91
SMPD4-203ENST00000412570 COX7A2P14406 83 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 ITGAXP20702 1163 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 ALAS2P22557 587 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 PTPN4P29074 926 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 RAB28P51157 221 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 OR1D5P58170 312 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 DEFB134Q4QY38 66 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 MFSD4BQ5TF39 518 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 REP15Q6BDI9 236 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 SHISA6Q6ZSJ9 500 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 OLIG3Q7RTU3 272 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 WDR53Q7Z5U6 358 aaPredicted RBP9.34□□□□□ -0.91
SMPD4-203ENST00000412570 SPATA24Q86W54 205 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 SPDL1Q96EA4 605 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 EIF3LQ9Y262 564 aaKnown RBP9.34□□□□□ -0.91
SMPD4-203ENST00000412570 LOC105369274A0A096LPK9 316 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 LOC102723532A0A0G2JNH3 316 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 SLCO1B7G3V0H7 640 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 K7ESF4 209 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 LSM1O15116 133 aaKnown RBP9.34□□□□□ -0.91
SMPD4-203ENST00000412570 GDF9O60383 454 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 DNAJB6O75190 326 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 SNRPB2P08579 225 aaKnown RBP9.34□□□□□ -0.91
SMPD4-203ENST00000412570 EBLN1P0CF75 366 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 SLC6A12P48065 614 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 HNMTP50135 292 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 VSX2P58304 361 aaPredicted RBP9.34□□□□□ -0.91
SMPD4-203ENST00000412570 MAP7Q14244 749 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 ERV3-1Q14264 604 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 AGERQ15109 404 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 CYP2A13Q16696 494 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 CACHD1Q5VU97 1274 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 LYSMD4Q5XG99 296 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 SLCO4C1Q6ZQN7 724 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 OR4N4Q8N0Y3 316 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 RAB42Q8N4Z0 105 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 ANKRD53Q8N9V6 530 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 AVL9Q8NBF6 648 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 FAM13CQ8NE31 585 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 MAGEC3Q8TD91 643 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 PTCD3Q96EY7 689 aaKnown RBP9.34□□□□□ -0.91
SMPD4-203ENST00000412570 OR52E6Q96RD3 313 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 NELL2Q99435 816 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 YIPF4Q9BSR8 244 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 ACSL5Q9ULC5 683 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 NDUFAF1Q9Y375 327 aa9.34□□□□□ -0.91
SMPD4-203ENST00000412570 A0A1W2PS29 197 aa9.33□□□□□ -0.92
SMPD4-203ENST00000412570 KRT36O76013 467 aa9.33□□□□□ -0.92
SMPD4-203ENST00000412570 C1GALT1C1LP0DN25 315 aa9.33□□□□□ -0.92
SMPD4-203ENST00000412570 CD27P26842 260 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms