RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 TMEM110-MUSTN1A8MSY1 372 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 A8MUI8 341 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 MAGEB17A8MXT2 336 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 FAM90A26D6RGX4 464 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 H3BQV1 296 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 O00370 1275 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 HS3ST1O14792 307 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 NDUFS4O43181 175 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 PLRG1O43660 514 aaKnown RBP2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 SNX3O60493 162 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 SERPINB7O75635 380 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 PSMD10O75832 226 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 PRSS1P07477 247 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 KRT16P08779 473 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 QDPRP09417 244 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 CLTAP09496 248 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 PABPC4LP0CB38 370 aaKnown RBP2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 MYBL1P10243 752 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 SRCP12931 536 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 TCP1P17987 556 aaKnown RBP2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 EIF2S2P20042 333 aaKnown RBP2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 NR2F2P24468 414 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 HOXD10P28358 340 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 TCF7P36402 384 aaPredicted RBP2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 HSD17B3P37058 310 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 APOBEC1P41238 236 aaKnown RBP2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 SYKP43405 635 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 ACADVLP49748 655 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 CCR3P51677 355 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 CLCNKAP51800 687 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 LINC01547P58512 204 aaPredicted RBP2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 LMO4P61968 165 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 SIRPAP78324 504 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 KRT83P78385 493 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 HPCAP84074 193 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 ROR1Q01973 937 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 C2orf54Q08AI8 447 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 ZBTB17Q13105 803 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 ALCAMQ13740 583 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 ITGA9Q13797 1035 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 HNRNPDQ14103 355 aaKnown RBP2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 GIT2Q14161 759 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 SPCS2Q15005 226 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 CTF1Q16619 201 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 MYLK3Q32MK0 819 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 CBWD6Q4V339 395 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 SMUG1Q53HV7 270 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 CBWD3Q5JTY5 395 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 C1orf141Q5JVX7 400 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 FAM69BQ5VUD6 431 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 PAPD4Q6PIY7 484 aaKnown RBP2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 BRAT1Q6PJG6 821 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 PACS1Q6VY07 963 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 INTS8Q75QN2 995 aaKnown RBP2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 CHST3Q7LGC8 479 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 HAUS6Q7Z4H7 955 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 PPP1R42Q7Z4L9 355 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 TMEM110Q86TL2 294 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 LDB1Q86U70 411 aaPredicted RBP2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 CCDC190Q86UF4 302 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 SFR1Q86XK3 245 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 IFT20Q8IY31 132 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 CIARTQ8N365 385 aaPredicted RBP2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 EMC1Q8N766 993 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 ZNF441Q8N8Z8 693 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 DMBX1Q8NFW5 382 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 TSPAN14Q8NG11 270 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 OR10S1Q8NGN2 331 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 THAP6Q8TBB0 222 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 TBC1D16Q8TBP0 767 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 DNAJC9Q8WXX5 260 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 LPGAT1Q92604 370 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 RND1Q92730 232 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 PRCCQ92733 491 aaPredicted RBP2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 PTERQ96BW5 349 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 RHBDF1Q96CC6 855 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 RMDN1Q96DB5 314 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 ARSGQ96EG1 525 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 PGM2Q96G03 612 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 CFAP57Q96MR6 1250 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 ZNF599Q96NL3 588 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 CATSPER2Q96P56 530 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 NEK1Q96PY6 1258 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 CDRT15Q96T59 188 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 CHP1Q99653 195 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 HNRNPABQ99729 332 aaKnown RBP2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 TMEM109Q9BVC6 243 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 EDEM3Q9BZQ6 932 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 KRT23Q9C075 422 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 NACA2Q9H009 215 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 PPIL3Q9H2H8 161 aaKnown RBP2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 LRMDAQ9H2I8 198 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 VCXQ9H320 206 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 KCNK15Q9H427 330 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 THAP9Q9H5L6 903 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 DNAJC18Q9H819 358 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 ECT2Q9H8V3 914 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 PCDH9Q9HC56 1237 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 PPANQ9NQ55 473 aaKnown RBP2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 SH3GLB2Q9NR46 395 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms