RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 PFASO15067 1338 aa3.69□□□□□ -1.82
RNU2-28P-201ENST00000410457 GREB1LQ9C091 1923 aaPredicted RBP3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 IGHV4-61A0A0C4DH41 118 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 GTPBP10A4D1E9 387 aaKnown RBP3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 SLC22A2O15244 555 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 DFFBO76075 338 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 DDHD2O94830 711 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 IGHV4-59P01825 116 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 FRMD6-AS1P0C7T7 363 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 F3P13726 295 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 ALDH4A1P30038 563 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 SFTPDP35247 375 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 OR3A3P47888 321 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 SERPINH1P50454 418 aaKnown RBP3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 STARD6P59095 220 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 CETN1Q12798 172 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 GPR17Q13304 367 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 OPCMLQ14982 345 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 ZC2HC1CQ53FD0 456 aaPredicted RBP3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 IFI44LQ53G44 452 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 PARP10Q53GL7 1025 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 XKR6Q5GH73 641 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 XKR3Q5GH77 459 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 AGAP6Q5VW22 663 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 PRAMEF8Q5VWM4 474 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 ETFRF1Q6IPR1 90 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 RAB12Q6IQ22 244 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 UGT3A1Q6NUS8 523 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 TTC27Q6P3X3 843 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 CNSTQ6PJW8 725 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 G2E3Q7L622 706 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 RABEPKQ7Z6M1 372 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 PRUNE1Q86TP1 453 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 RCOR2Q8IZ40 523 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 KLHDC1Q8N7A1 406 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 ZNF383Q8NA42 475 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 OR13C3Q8NGS6 347 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 LMO3Q8TAP4 145 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 LRRC8CQ8TDW0 803 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 CCDC3Q9BQI4 270 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 PSD2Q9BQI7 771 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 SPXQ9BT56 116 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 WACQ9BTA9 647 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 TRIM7Q9C029 511 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 RAVER2Q9HCJ3 691 aaKnown RBP3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 HMG20BQ9P0W2 317 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 TAAR2Q9P1P5 351 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 GMEB2Q9UKD1 530 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 GRID1Q9ULK0 1009 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 AGTPBP1Q9UPW5 1226 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 RIPK3Q9Y572 518 aa3.68□□□□□ -1.82
RNU2-28P-201ENST00000410457 A0A087X0K7 114 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 TRBV5-5A0A0J9YX44 114 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 H0YIG0 161 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 ZNF197O14709 1029 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 VEGFDO43915 354 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 GLRA3O75311 464 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 ATP1A1P05023 1023 aaKnown RBP3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 YES1P07947 543 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 TYMPP19971 482 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 ELAVL4P26378 380 aaKnown RBP3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 SSTR1P30872 391 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 CETN2P41208 172 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 MAGEB1P43366 347 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 UCP2P55851 309 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 CLDN17P56750 224 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 YBEYP58557 167 aaPredicted RBP3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 SLC34A1Q06495 639 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 CCDC6Q16204 474 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 GPR33Q49SQ1 333 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 WDR38Q5JTN6 314 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 PM20D1Q6GTS8 502 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 CPEB2Q7Z5Q1 589 aaKnown RBP3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 KLHDC9Q8NEP7 349 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 ST7LQ8TDW4 575 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 PIK3R3Q92569 461 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 CFAP36Q96G28 342 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 EPSTI1Q96J88 318 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 BTBD9Q96Q07 612 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 CDCA3Q99618 268 aaPredicted RBP3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 PRMT1Q99873 361 aaKnown RBP3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 ZNF559Q9BR84 538 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 TRMT61BQ9BVS5 477 aaKnown RBP3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 IDI2Q9BXS1 227 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 PITPNM3Q9BZ71 974 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 SHARPINQ9H0F6 387 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 TSPYL1Q9H0U9 437 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 NAPBQ9H115 298 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 P2RY12Q9H244 342 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 TNMDQ9H2S6 317 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 CUEDC2Q9H467 287 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 RNF121Q9H920 327 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 MAGEF1Q9HAY2 307 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 ZFP57Q9NU63 452 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 ANO10Q9NW15 660 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 ODF2LQ9ULJ1 636 aa3.67□□□□□ -1.82
RNU2-28P-201ENST00000410457 KIAA1217Q5T5P2 1943 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 C5orf51A6NDU8 294 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 ANKDD1BA6NHY2 528 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 SLC9B1P1A6NJY1 282 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms