RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 CCDC90BQ9GZT6 254 aa15.35■□□□□ 0.05
HOXD3-202ENST00000410016 CHST8Q9H2A9 424 aa15.35■□□□□ 0.05
HOXD3-202ENST00000410016 RIBC2Q9H4K1 309 aa15.35■□□□□ 0.05
HOXD3-202ENST00000410016 TPT1P8Q9HAU6 139 aa15.35■□□□□ 0.05
HOXD3-202ENST00000410016 PAK6Q9NQU5 681 aaPredicted RBP15.35■□□□□ 0.05
HOXD3-202ENST00000410016 ERVK-18Q9QC07 812 aa15.35■□□□□ 0.05
HOXD3-202ENST00000410016 PCDHB11Q9Y5F2 797 aa15.35■□□□□ 0.05
HOXD3-202ENST00000410016 PCDHGA10Q9Y5H3 936 aa15.35■□□□□ 0.05
HOXD3-202ENST00000410016 MYO1GB0I1T2 1018 aa15.35■□□□□ 0.05
HOXD3-202ENST00000410016 CFAP99D6REC4 459 aa15.35■□□□□ 0.05
HOXD3-202ENST00000410016 CPSF4O95639 269 aaKnown RBP15.35■□□□□ 0.05
HOXD3-202ENST00000410016 PABPC1P11940 636 aaKnown RBP15.35■□□□□ 0.05
HOXD3-202ENST00000410016 RAB15P59190 212 aa15.35■□□□□ 0.05
HOXD3-202ENST00000410016 VEZF1Q14119 521 aa15.35■□□□□ 0.05
HOXD3-202ENST00000410016 ACOX1Q15067 660 aa15.35■□□□□ 0.05
HOXD3-202ENST00000410016 HENMT1Q5T8I9 393 aaKnown RBP15.35■□□□□ 0.05
HOXD3-202ENST00000410016 TMEM215Q68D42 235 aa15.35■□□□□ 0.05
HOXD3-202ENST00000410016 GPR65Q8IYL9 337 aa15.35■□□□□ 0.05
HOXD3-202ENST00000410016 HSH2DQ96JZ2 352 aa15.35■□□□□ 0.05
HOXD3-202ENST00000410016 PCDH12Q9NPG4 1184 aa15.35■□□□□ 0.05
HOXD3-202ENST00000410016 PDP1Q9P0J1 537 aaPredicted RBP15.35■□□□□ 0.05
HOXD3-202ENST00000410016 C1orf226A1L170 272 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 TMEM229AB2RXF0 380 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 NEDD8-MDP1E9PL57 170 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 E9PQ18 207 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 NUDT7P0C024 238 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 EFNA1P20827 205 aaPredicted RBP15.34■□□□□ 0.05
HOXD3-202ENST00000410016 VIPR1P32241 457 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 ACSM2AQ08AH3 577 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 NAE1Q13564 534 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 DDX39BQ13838 428 aaKnown RBP15.34■□□□□ 0.05
HOXD3-202ENST00000410016 NPTX1Q15818 432 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 ACSM2BQ68CK6 577 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 AGTRAPQ6RW13 159 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 ZNF554Q86TJ5 538 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 CCDC71Q8IV32 467 aaPredicted RBP15.34■□□□□ 0.05
HOXD3-202ENST00000410016 LILRA3Q8N6C8 439 aaPredicted RBP15.34■□□□□ 0.05
HOXD3-202ENST00000410016 SNRNP27Q8WVK2 155 aaKnown RBP15.34■□□□□ 0.05
HOXD3-202ENST00000410016 CLP1Q92989 425 aaKnown RBP15.34■□□□□ 0.05
HOXD3-202ENST00000410016 SH3KBP1Q96B97 665 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 METTL2AQ96IZ6 378 aaKnown RBP15.34■□□□□ 0.05
HOXD3-202ENST00000410016 C7orf34Q96L11 122 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 CORO1BQ9BR76 489 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 SIRT5Q9NXA8 310 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 STOX2Q9P2F5 926 aaPredicted RBP15.34■□□□□ 0.05
HOXD3-202ENST00000410016 PRRC2BQ5JSZ5 2229 aaKnown RBP15.34■□□□□ 0.05
HOXD3-202ENST00000410016 NPC1O15118 1278 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 GABARAPO95166 117 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 C8AP07357 584 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 CTSCP53634 463 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 DEFB115Q30KQ5 88 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 TRIM60Q495X7 471 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 GRHL2Q6ISB3 625 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 C16orf87Q6PH81 154 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 TSPYL5Q86VY4 417 aaPredicted RBP15.34■□□□□ 0.05
HOXD3-202ENST00000410016 TTC29Q8NA56 475 aaPredicted RBP15.34■□□□□ 0.05
HOXD3-202ENST00000410016 COX4I2Q96KJ9 171 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 DUSP26Q9BV47 211 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 RIOK2Q9BVS4 552 aaKnown RBP15.34■□□□□ 0.05
HOXD3-202ENST00000410016 ZBP1Q9H171 429 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 BRF2Q9HAW0 419 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 FAM8A1Q9UBU6 413 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 OGDHLQ9ULD0 1010 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 SAMHD1Q9Y3Z3 626 aaKnown RBP15.34■□□□□ 0.05
HOXD3-202ENST00000410016 DGKBQ9Y6T7 804 aa15.34■□□□□ 0.05
HOXD3-202ENST00000410016 SCAMP2O15127 329 aaKnown RBP15.33■□□□□ 0.04
HOXD3-202ENST00000410016 TSPAN6O43657 245 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 MAN1A2O60476 641 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 DPM1O60762 260 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 LEFTY1O75610 366 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 SULT1C4O75897 302 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 FKBP9O95302 570 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 TIMP2P16035 220 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 HNF4AP41235 474 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 FAHD1Q6P587 224 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 KLHDC8AQ8IYD2 350 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 TRAM1L1Q8N609 369 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 MYOCQ99972 504 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 RHNO1Q9BSD3 238 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 TPRKBQ9Y3C4 175 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 GMPPBQ9Y5P6 360 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 DOCK6Q96HP0 2047 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 CBFA2T3O75081 653 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 SLC16A8O95907 504 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 CYP2A6P11509 494 aaPredicted RBP15.33■□□□□ 0.04
HOXD3-202ENST00000410016 HSD3B1P14060 373 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 HSD3B2P26439 372 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 MAP2K4P45985 399 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 MASP1P48740 699 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 ITGA1P56199 1179 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 KCNJ10P78508 379 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 IL1RL1Q01638 556 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 SMN1Q16637 294 aaKnown RBP15.33■□□□□ 0.04
HOXD3-202ENST00000410016 SYT6Q5T7P8 510 aaPredicted RBP15.33■□□□□ 0.04
HOXD3-202ENST00000410016 PDE12Q6L8Q7 609 aaKnown RBP15.33■□□□□ 0.04
HOXD3-202ENST00000410016 CAMKMTQ7Z624 323 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 C1orf52Q8N6N3 182 aaKnown RBP15.33■□□□□ 0.04
HOXD3-202ENST00000410016 RASGEF1AQ8N9B8 481 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 CHPT1Q8WUD6 406 aa15.33■□□□□ 0.04
HOXD3-202ENST00000410016 CHTF18Q8WVB6 975 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms