RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TLX1P31314 330 aaPredicted RBP3.4□□□□□ -1.86
PMS1-203ENST00000409593 DCDC1P59894 354 aa3.4□□□□□ -1.86
PMS1-203ENST00000409593 ILF2Q12905 390 aaKnown RBP3.4□□□□□ -1.86
PMS1-203ENST00000409593 FAM189A2Q15884 450 aa3.4□□□□□ -1.86
PMS1-203ENST00000409593 CST9LP1Q5W188 147 aa3.4□□□□□ -1.86
PMS1-203ENST00000409593 IL17RELQ6ZVW7 336 aa3.4□□□□□ -1.86
PMS1-203ENST00000409593 MAML2Q8IZL2 1156 aaPredicted RBP3.4□□□□□ -1.86
PMS1-203ENST00000409593 LRTM2Q8N967 370 aa3.4□□□□□ -1.86
PMS1-203ENST00000409593 MRPS27Q92552 414 aaKnown RBP3.4□□□□□ -1.86
PMS1-203ENST00000409593 CENPOQ9BU64 300 aa3.4□□□□□ -1.86
PMS1-203ENST00000409593 LNPEPQ9UIQ6 1025 aa3.4□□□□□ -1.86
PMS1-203ENST00000409593 WIPI2Q9Y4P8 454 aa3.4□□□□□ -1.86
PMS1-203ENST00000409593 LOC105371242A0A075B767 164 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 C2CD4DB7Z1M9 353 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 THEGLP0DJG4 465 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 OXTRP30559 389 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 HSPA4P34932 840 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 LIMK1P53667 647 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 CLDN15P56746 228 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 PAX8Q06710 450 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 KRT80Q6KB66 452 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 PI4KAP1Q8N8J0 262 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 AMER3Q8N944 861 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 C9orf43Q8TAL5 461 aaPredicted RBP3.39□□□□□ -1.87
PMS1-203ENST00000409593 SLC45A3Q96JT2 553 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 CFAP57Q96MR6 1250 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 FAM218AQ96MZ4 157 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 KLHL5Q96PQ7 755 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 BTBD9Q96Q07 612 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 RAB11FIP5Q9BXF6 653 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 ANKEF1Q9NU02 776 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 PRDM4Q9UKN5 801 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 CSAG2Q9Y5P2 127 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 HPRP00739 348 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 SERPING1P05155 500 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 PPP5CP53041 499 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 DHODHQ02127 395 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 COX10Q12887 443 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 LY6DQ14210 128 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 RASA2Q15283 850 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 OR4C11Q6IEV9 310 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 SLC30A6Q6NXT4 461 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 LCLAT1Q6UWP7 414 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 PCGF5Q86SE9 256 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 Q8N377 158 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 TCEANCQ8N8B7 351 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 OR4C15Q8NGM1 316 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 RASL10AQ92737 203 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 GAL3ST4Q96RP7 486 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 LGMNQ99538 433 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 CDCA3Q99618 268 aaPredicted RBP3.39□□□□□ -1.87
PMS1-203ENST00000409593 GTPBP2Q9BX10 602 aaKnown RBP3.39□□□□□ -1.87
PMS1-203ENST00000409593 TRIM6Q9C030 488 aaPredicted RBP3.39□□□□□ -1.87
PMS1-203ENST00000409593 RNF121Q9H920 327 aa3.39□□□□□ -1.87
PMS1-203ENST00000409593 SLC1A7O00341 560 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 TFECO14948 347 aaPredicted RBP3.38□□□□□ -1.87
PMS1-203ENST00000409593 SURF4O15260 269 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 LDHCP07864 332 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 STAG3L1P0CL83 205 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 AADACP22760 399 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 SFTPDP35247 375 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 HSD17B3P37058 310 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 DLK1P80370 383 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 MZT1Q08AG7 82 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 PTGISQ16647 500 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 LACTB2Q53H82 288 aaPredicted RBP3.38□□□□□ -1.87
PMS1-203ENST00000409593 ZNF774Q6NX45 483 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 CYB5D1Q6P9G0 228 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 ENPP7Q6UWV6 458 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 GDPGP1Q6ZNW5 385 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 CDC20BQ86Y33 519 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 RCOR2Q8IZ40 523 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 GPC2Q8N158 579 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 TDRD5Q8NAT2 981 aaKnown RBP3.38□□□□□ -1.87
PMS1-203ENST00000409593 CAMKVQ8NCB2 501 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 LRRC15Q8TF66 581 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 CHPT1Q8WUD6 406 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 PYCR2Q96C36 320 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 RMDN1Q96DB5 314 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 PGM2Q96G03 612 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 LRRC3BQ96PB8 259 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 OVOL2Q9BRP0 275 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 SDCBP2Q9H190 292 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 TMX4Q9H1E5 349 aaPredicted RBP3.38□□□□□ -1.87
PMS1-203ENST00000409593 EGLN3Q9H6Z9 239 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 MTHFD2LQ9H903 347 aaPredicted RBP3.38□□□□□ -1.87
PMS1-203ENST00000409593 HACD3Q9P035 362 aa3.38□□□□□ -1.87
PMS1-203ENST00000409593 ELF5Q9UKW6 265 aaPredicted RBP3.38□□□□□ -1.87
PMS1-203ENST00000409593 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.38□□□□□ -1.87
PMS1-203ENST00000409593 UBE2CO00762 179 aa3.37□□□□□ -1.87
PMS1-203ENST00000409593 CEACAM4O75871 244 aa3.37□□□□□ -1.87
PMS1-203ENST00000409593 IGHV3-13P01766 116 aa3.37□□□□□ -1.87
PMS1-203ENST00000409593 ERCC2P18074 760 aa3.37□□□□□ -1.87
PMS1-203ENST00000409593 KRT20P35900 424 aa3.37□□□□□ -1.87
PMS1-203ENST00000409593 CSRP3P50461 194 aa3.37□□□□□ -1.87
PMS1-203ENST00000409593 KRTAP10-3P60369 221 aa3.37□□□□□ -1.87
PMS1-203ENST00000409593 TRA2AQ13595 282 aaKnown RBP eCLIP3.37□□□□□ -1.87
PMS1-203ENST00000409593 KYNUQ16719 465 aa3.37□□□□□ -1.87
PMS1-203ENST00000409593 FGD3Q5JSP0 725 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms