RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 HPP00738 406 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 ITGA8P53708 1063 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 YBX1P67809 324 aaKnown RBP13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 KLC1Q07866 573 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 INPP5JQ15735 1006 aaPredicted RBP13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 HECTD2Q5U5R9 776 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 SLC6A19Q695T7 634 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 NIPAL1Q6NVV3 410 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 IGFL2Q6UWQ7 119 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 NDUFAF7Q7L592 441 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 C17orf64Q86WR6 236 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 IGDCC3Q8IVU1 814 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 IQCKQ8N0W5 287 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 FAM26EQ8N5C1 309 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 NKAPQ8N5F7 415 aaKnown RBP13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 TBC1D19Q8N5T2 526 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 RBMXL3Q8N7X1 1067 aaKnown RBP13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 CAMKVQ8NCB2 501 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 PPFIBP2Q8ND30 876 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 OR11G2Q8NGC1 345 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 C10orf90Q96M02 699 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 NDNQ99608 321 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 SARGQ9BW04 601 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 SGPP1Q9BX95 441 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 SLC29A3Q9BZD2 475 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 SOX17Q9H6I2 414 aaPredicted RBP13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 MOCS1Q9NZB8 636 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 ZFATQ9P243 1243 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 CTSFQ9UBX1 484 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 C3orf18Q9UK00 162 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 FBXL4Q9UKA2 621 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 RUVBL1Q9Y265 456 aaKnown RBP13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 MAU2Q9Y6X3 613 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 FAM187AA6NFU0 413 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 E7ESA3 106 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 TTI1O43156 1089 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 ACPPP15309 386 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 NPPBP16860 134 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 IL10P22301 178 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 ITGA3P26006 1051 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 EMP2P54851 167 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 CDKN2DP55273 166 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 SKP1P63208 163 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 MGAT5Q09328 741 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 CALCOCO2Q13137 446 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 COLEC12Q5KU26 742 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 Q6ZS92 163 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 ARHGEF39Q8N4T4 335 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 GPATCH11Q8N954 259 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 ABHD11Q8NFV4 315 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 TM4SF19Q96DZ7 209 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 MMABQ96EY8 250 aaPredicted RBP13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 LINGO1Q96FE5 620 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 VPS39Q96JC1 886 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 ARL15Q9NXU5 204 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 WHRNQ9P202 907 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 TRPC4Q9UBN4 977 aa13.82□□□□□ -0.2
NIF3L1-205ENST00000409588 FER1L5A0AVI2 2057 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 MAP2K7O14733 419 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 EIF3HO15372 352 aaKnown RBP eCLIP13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 NSA2O95478 260 aaKnown RBP13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 TSPAN12O95859 305 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 TBPL1P62380 186 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 PDIA2Q13087 525 aaKnown RBP13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 NAE1Q13564 534 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 HKDC1Q2TB90 917 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 PLEKHN1Q494U1 663 aaPredicted RBP13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 RIPOR1Q6ZS17 1223 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 STRA8Q7Z7C7 330 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 KBTBD2Q8IY47 623 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 OR4K1Q8NGD4 311 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 OR56A3Q8NH54 315 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 PPP4R1Q8TF05 950 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 FBXL8Q96CD0 374 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 CFAP36Q96G28 342 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 ERP44Q9BS26 406 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 YIPF2Q9BWQ6 316 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 EPS8L2Q9H6S3 715 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 CLK4Q9HAZ1 481 aaKnown RBP13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 POPDC3Q9HBV1 291 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 ADAMTS6Q9UKP5 1117 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 CHMP2BQ9UQN3 213 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 SLC22A7Q9Y694 548 aa13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 PRRC2CQ9Y520 2896 aaKnown RBP13.81□□□□□ -0.2
NIF3L1-205ENST00000409588 IDSB3KWA1 339 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 HAT1O14929 419 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 FOXS1O43638 330 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 NRP2O60462 931 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 BANF1O75531 89 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 MED26O95402 600 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 HEXBP07686 556 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 GSTA2P09210 222 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 MYBL2P10244 700 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 HNMTP50135 292 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 CCR8P51685 355 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 CSNK1G2P78368 415 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 CDKL1Q00532 357 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 CAV1Q03135 178 aa13.8□□□□□ -0.2
NIF3L1-205ENST00000409588 PWP1Q13610 501 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms