RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 MLLT3P42568 568 aaPredicted RBP15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 CASP2P42575 452 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 ERVPABLB-1P60509 514 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 ABCE1P61221 599 aaKnown RBP15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 PPP1CAP62136 330 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 CHIT1Q13231 466 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 TRA2AQ13595 282 aaKnown RBP eCLIP15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 TBC1D25Q3MII6 688 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 XKR6Q5GH73 641 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 PAGE2BQ5JRK9 111 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 CACHD1Q5VU97 1274 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 KIAA1614Q5VZ46 1190 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 FOXR1Q6PIV2 292 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 NXPE4Q6UWF7 544 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 SLCO4C1Q6ZQN7 724 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 RPS27LQ71UM5 84 aaKnown RBP15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 ADCK2Q7Z695 626 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 MILR1Q7Z6M3 343 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 TRIM73Q86UV7 250 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 KMT5CQ86Y97 462 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 KRT78Q8N1N4 520 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 ZNF75CPQ92670 426 aaPredicted RBP15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 WDR34Q96EX3 536 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 MAP3K3Q99759 626 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 AIF1LQ9BQI0 150 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 AKAP7Q9P0M2 348 aaPredicted RBP15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 PDP2Q9P2J9 529 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 RAXQ9Y2V3 346 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 H7BY64 318 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 WFS1O76024 890 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 TNFSF15O95150 251 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 CLDN9O95484 217 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 ESRRBO95718 433 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 HSPA4LO95757 839 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 ANKRD34CP0C6C1 535 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 EPORP19235 508 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 MAGP20916 626 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 MDH1P40925 334 aaKnown RBP15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 SLC1A6P48664 564 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 BST1Q10588 318 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 E2F2Q14209 437 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 HIST2H2ACQ16777 129 aaPredicted RBP15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 GGTA1PQ4G0N0 100 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 ARL13AQ5H913 290 aaPredicted RBP15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 HIST2H2AA3Q6FI13 130 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 FIGLAQ6QHK4 219 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 GPRIN3Q6ZVF9 776 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 MTERF4Q7Z6M4 381 aaKnown RBP15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 L3MBTL4Q8NA19 623 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 OR4K1Q8NGD4 311 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 UBE2E3Q969T4 207 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 MOCOSQ96EN8 888 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 PRAP1Q96NZ9 151 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 TRAPPC9Q96Q05 1148 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 PLCD4Q9BRC7 762 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 CHRNA10Q9GZZ6 450 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 SLC6A20Q9NP91 592 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 MID1IP1Q9NPA3 183 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 ASCL3Q9NQ33 180 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 ACSS2Q9NR19 701 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 THSD1Q9NS62 852 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 THAP1Q9NVV9 213 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 CUEDC1Q9NWM3 386 aaPredicted RBP15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 SEMA5BQ9P283 1151 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 KLHL3Q9UH77 587 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 SH2B3Q9UQQ2 575 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 WDFY3Q8IZQ1 3526 aa15.85■□□□□ 0.13
TSPAN4-208ENST00000409531 KIF26BQ2KJY2 2108 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 ANKRD11Q6UB99 2663 aaPredicted RBP15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 IGKV1-8A0A0C4DH67 115 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 HGSO14964 777 aaPredicted RBP15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 TLX3O43711 291 aaPredicted RBP15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 ENO1P06733 434 aaKnown RBP15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 JMJD7P0C870 316 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 THRAP10827 490 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 EZRP15311 586 aaKnown RBP15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 TSPAN8P19075 237 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 ARL4DP49703 201 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 RELAQ04206 551 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 TRAF3Q13114 568 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 DOC2AQ14183 400 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 C16orf72Q14CZ0 275 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 SNAP47Q5SQN1 464 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 CATSPEREQ5SY80 951 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 GRHL2Q6ISB3 625 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 ZNF425Q6IV72 752 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 RGS9BPQ6ZS82 235 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 MYLK4Q86YV6 388 aaPredicted RBP15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 FAM20CQ8IXL6 584 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 C19orf47Q8N9M1 422 aaKnown RBP15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 OR4F6Q8NGB9 312 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 OR52B6Q8NGF0 335 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 SNIP1Q8TAD8 396 aaKnown RBP15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 AGAP11Q8TF27 550 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 REPS1Q96D71 796 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 TCTN2Q96GX1 697 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 CCDC74BQ96LY2 380 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 ZNF768Q9H5H4 540 aaKnown RBP15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 PDE7BQ9NP56 450 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 TMEM9Q9P0T7 183 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms