RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 TTC29Q8NA56 475 aaPredicted RBP18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 ZSCAN1Q8NBB4 408 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 CT55Q8WUE5 264 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 CAVIN3Q969G5 261 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 THAP11Q96EK4 314 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 CRELD1Q96HD1 420 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 TSNARE1Q96NA8 513 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 GBP5Q96PP8 586 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 TMEM79Q9BSE2 394 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 GPR87Q9BY21 358 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 CHST8Q9H2A9 424 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 PRORYQ9H606 182 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 CUTCQ9NTM9 273 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 TXLNGQ9NUQ3 528 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 DHCR7Q9UBM7 475 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 IL17BQ9UHF5 180 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 KCND3Q9UK17 655 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 RAB21Q9UL25 225 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 PCDHGA4Q9Y5G9 962 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 HYKKA2RU49 373 aa18.96■□□□□ 0.63
PDLIM2-207ENST00000409417 LOC400499M0QZD8 3231 aa18.96■□□□□ 0.63
PDLIM2-207ENST00000409417 UBXN8O00124 270 aa18.96■□□□□ 0.63
PDLIM2-207ENST00000409417 TXNDC9O14530 226 aa18.96■□□□□ 0.63
PDLIM2-207ENST00000409417 RBP1P09455 135 aa18.96■□□□□ 0.63
PDLIM2-207ENST00000409417 GNAZP19086 355 aa18.96■□□□□ 0.63
PDLIM2-207ENST00000409417 AGXTP21549 392 aa18.96■□□□□ 0.63
PDLIM2-207ENST00000409417 F8A1P23610 371 aa18.96■□□□□ 0.63
PDLIM2-207ENST00000409417 EMP3P54852 163 aa18.96■□□□□ 0.63
PDLIM2-207ENST00000409417 DCDP81605 110 aaKnown RBP18.96■□□□□ 0.63
PDLIM2-207ENST00000409417 LCN10Q6JVE6 187 aa18.96■□□□□ 0.63
PDLIM2-207ENST00000409417 TDRPQ86YL5 185 aa18.96■□□□□ 0.63
PDLIM2-207ENST00000409417 SARGQ9BW04 601 aa18.96■□□□□ 0.63
PDLIM2-207ENST00000409417 CAPS2Q9BXY5 557 aa18.96■□□□□ 0.63
PDLIM2-207ENST00000409417 ZNF358Q9NW07 568 aa18.96■□□□□ 0.63
PDLIM2-207ENST00000409417 TBK1Q9UHD2 729 aa18.96■□□□□ 0.63
PDLIM2-207ENST00000409417 PCDHGA6Q9Y5G7 932 aa18.96■□□□□ 0.63
PDLIM2-207ENST00000409417 CHD6Q8TD26 2715 aa18.95■□□□□ 0.62
PDLIM2-207ENST00000409417 A0A1B0GX78 115 aa18.95■□□□□ 0.62
PDLIM2-207ENST00000409417 MAP2K7O14733 419 aa18.95■□□□□ 0.62
PDLIM2-207ENST00000409417 ALAS2P22557 587 aa18.95■□□□□ 0.62
PDLIM2-207ENST00000409417 HSPA7P48741 367 aa18.95■□□□□ 0.62
PDLIM2-207ENST00000409417 CDC16Q13042 620 aa18.95■□□□□ 0.62
PDLIM2-207ENST00000409417 DNASE1L3Q13609 305 aa18.95■□□□□ 0.62
PDLIM2-207ENST00000409417 RASA2Q15283 850 aa18.95■□□□□ 0.62
PDLIM2-207ENST00000409417 FBXO48Q5FWF7 155 aa18.95■□□□□ 0.62
PDLIM2-207ENST00000409417 CATSPEREQ5SY80 951 aa18.95■□□□□ 0.62
PDLIM2-207ENST00000409417 ARHGAP40Q5TG30 622 aa18.95■□□□□ 0.62
PDLIM2-207ENST00000409417 C1orf189Q5VU69 101 aa18.95■□□□□ 0.62
PDLIM2-207ENST00000409417 NXPE4Q6UWF7 544 aa18.95■□□□□ 0.62
PDLIM2-207ENST00000409417 TTLL10Q6ZVT0 673 aa18.95■□□□□ 0.62
PDLIM2-207ENST00000409417 UBTD2Q8WUN7 234 aa18.95■□□□□ 0.62
PDLIM2-207ENST00000409417 CD244Q9BZW8 370 aa18.95■□□□□ 0.62
PDLIM2-207ENST00000409417 PELI2Q9HAT8 420 aa18.95■□□□□ 0.62
PDLIM2-207ENST00000409417 DNAJC11Q9NVH1 559 aa18.95■□□□□ 0.62
PDLIM2-207ENST00000409417 NBEAQ8NFP9 2946 aa18.94■□□□□ 0.62
PDLIM2-207ENST00000409417 FEZF1A0PJY2 475 aa18.94■□□□□ 0.62
PDLIM2-207ENST00000409417 DSCR3O14972 297 aa18.94■□□□□ 0.62
PDLIM2-207ENST00000409417 NUDT17P0C025 328 aa18.94■□□□□ 0.62
PDLIM2-207ENST00000409417 RAB40ALP0C0E4 278 aa18.94■□□□□ 0.62
PDLIM2-207ENST00000409417 BCL6P41182 706 aa18.94■□□□□ 0.62
PDLIM2-207ENST00000409417 TECRLQ5HYJ1 363 aa18.94■□□□□ 0.62
PDLIM2-207ENST00000409417 VN1R4Q7Z5H5 301 aa18.94■□□□□ 0.62
PDLIM2-207ENST00000409417 LCA5Q86VQ0 697 aa18.94■□□□□ 0.62
PDLIM2-207ENST00000409417 TBC1D19Q8N5T2 526 aa18.94■□□□□ 0.62
PDLIM2-207ENST00000409417 ACMSDQ8TDX5 336 aa18.94■□□□□ 0.62
PDLIM2-207ENST00000409417 MZB1Q8WU39 189 aa18.94■□□□□ 0.62
PDLIM2-207ENST00000409417 ESAMQ96AP7 390 aa18.94■□□□□ 0.62
PDLIM2-207ENST00000409417 C17orf62Q9BQA9 187 aa18.94■□□□□ 0.62
PDLIM2-207ENST00000409417 NLNQ9BYT8 704 aa18.94■□□□□ 0.62
PDLIM2-207ENST00000409417 GPRC5BQ9NZH0 403 aa18.94■□□□□ 0.62
PDLIM2-207ENST00000409417 TRBC2A0A5B9 178 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 ZNF891A8MT65 544 aaPredicted RBP18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 KLK8O60259 260 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 LCMT2O60294 686 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 CAPN1P07384 714 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 GFAPP14136 432 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 PTPN4P29074 926 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 SLCO1A2P46721 670 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 AGTR2P50052 363 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 ALDH18A1P54886 795 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 RPS15P62841 145 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 MEF2AQ02078 507 aaPredicted RBP18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 COL9A2Q14055 689 aaPredicted RBP18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 PDK4Q16654 411 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 PFKFB4Q16877 469 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 MUM1Q2TAK8 710 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 HKDC1Q2TB90 917 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 NKAIN1Q4KMZ8 207 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 GARNL3Q5VVW2 1013 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 FAM198BQ6UWH4 519 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 SLCO4C1Q6ZQN7 724 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 LRRC70Q7Z2Q7 622 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 GPR155Q7Z3F1 870 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 TMPRSS11BQ86T26 416 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 MFSD9Q8NBP5 474 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 STARD8Q92502 1023 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 MRPL57Q9BQC6 102 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 AIF1LQ9BQI0 150 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 NDOR1Q9UHB4 597 aa18.93■□□□□ 0.62
PDLIM2-207ENST00000409417 RUVBL1Q9Y265 456 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms