RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 P2RX6O15547 441 aa15.73■□□□□ 0.11
CHMP3-203ENST00000409225 SUN1O94901 812 aa15.73■□□□□ 0.11
CHMP3-203ENST00000409225 MSX1P28360 303 aa15.73■□□□□ 0.11
CHMP3-203ENST00000409225 SNRPNP63162 240 aaKnown RBP15.73■□□□□ 0.11
CHMP3-203ENST00000409225 TFF3Q07654 80 aa15.73■□□□□ 0.11
CHMP3-203ENST00000409225 MYBPHQ13203 477 aa15.73■□□□□ 0.11
CHMP3-203ENST00000409225 TSTA3Q13630 321 aaPredicted RBP15.73■□□□□ 0.11
CHMP3-203ENST00000409225 FASTKD1Q53R41 847 aaKnown RBP15.73■□□□□ 0.11
CHMP3-203ENST00000409225 SUSD1Q6UWL2 747 aa15.73■□□□□ 0.11
CHMP3-203ENST00000409225 ZNF534Q76KX8 674 aa15.73■□□□□ 0.11
CHMP3-203ENST00000409225 ANKRD37Q7Z713 158 aa15.73■□□□□ 0.11
CHMP3-203ENST00000409225 LDB1Q86U70 411 aaPredicted RBP15.73■□□□□ 0.11
CHMP3-203ENST00000409225 ARHGEF39Q8N4T4 335 aa15.73■□□□□ 0.11
CHMP3-203ENST00000409225 HORMAD2Q8N7B1 307 aa15.73■□□□□ 0.11
CHMP3-203ENST00000409225 OR6P1Q8NGX9 317 aa15.73■□□□□ 0.11
CHMP3-203ENST00000409225 OR4L1Q8NH43 312 aa15.73■□□□□ 0.11
CHMP3-203ENST00000409225 RERGQ96A58 199 aaPredicted RBP15.73■□□□□ 0.11
CHMP3-203ENST00000409225 SPATA7Q9P0W8 599 aa15.73■□□□□ 0.11
CHMP3-203ENST00000409225 GNPTGQ9UJJ9 305 aa15.73■□□□□ 0.11
CHMP3-203ENST00000409225 INTUQ9ULD6 942 aa15.73■□□□□ 0.11
CHMP3-203ENST00000409225 HCFC1P51610 2035 aa15.73■□□□□ 0.11
CHMP3-203ENST00000409225 IGKV1-8A0A0C4DH67 115 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 PHF2O75151 1096 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 NEURL1O76050 574 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 TOXO94900 526 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 ZWINTO95229 277 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 STATHP02808 62 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 CHRNB4P30926 498 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 RPA3P35244 121 aaPredicted RBP15.72■□□□□ 0.11
CHMP3-203ENST00000409225 PTGS2P35354 604 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 PPARGP37231 505 aaPredicted RBP15.72■□□□□ 0.11
CHMP3-203ENST00000409225 CCNFP41002 786 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 AVPR1BP47901 424 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 COPS2P61201 443 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 FOXD4Q12950 439 aaPredicted RBP15.72■□□□□ 0.11
CHMP3-203ENST00000409225 PTRHD1Q6GMV3 140 aaKnown RBP15.72■□□□□ 0.11
CHMP3-203ENST00000409225 OR52K1Q8NGK4 314 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 OR9A4Q8NGU2 314 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 LILRB4Q8NHJ6 448 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 FAM57AQ8TBR7 257 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 M1APQ8TC57 530 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 FOPNLQ96NB1 174 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 OR2A5Q96R48 311 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 OSBPL8Q9BZF1 889 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 KCNJ16Q9NPI9 418 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 LRFN1Q9P244 771 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 KCNN3Q9UGI6 736 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 PCYOX1Q9UHG3 505 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 RNF6Q9Y252 685 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 MRFAP1Q9Y605 127 aa15.72■□□□□ 0.11
CHMP3-203ENST00000409225 MAP1AP78559 2803 aaPredicted RBP15.72■□□□□ 0.11
CHMP3-203ENST00000409225 A0A1B0GTH9 108 aa15.71■□□□□ 0.11
CHMP3-203ENST00000409225 SOWAHDA6NJG2 315 aa15.71■□□□□ 0.11
CHMP3-203ENST00000409225 TMEM200CA6NKL6 621 aa15.71■□□□□ 0.11
CHMP3-203ENST00000409225 SLC25A12O75746 678 aa15.71■□□□□ 0.11
CHMP3-203ENST00000409225 FOLH1Q04609 750 aa15.71■□□□□ 0.11
CHMP3-203ENST00000409225 CEBPEQ15744 281 aa15.71■□□□□ 0.11
CHMP3-203ENST00000409225 EXT1Q16394 746 aa15.71■□□□□ 0.11
CHMP3-203ENST00000409225 NDUFA9Q16795 377 aa15.71■□□□□ 0.11
CHMP3-203ENST00000409225 TSTD2Q5T7W7 516 aa15.71■□□□□ 0.11
CHMP3-203ENST00000409225 ZNF468Q5VIY5 522 aaPredicted RBP15.71■□□□□ 0.11
CHMP3-203ENST00000409225 TMEM211Q6ICI0 200 aa15.71■□□□□ 0.11
CHMP3-203ENST00000409225 SLC5A8Q8N695 610 aa15.71■□□□□ 0.11
CHMP3-203ENST00000409225 FAM71DQ8N9W8 422 aa15.71■□□□□ 0.11
CHMP3-203ENST00000409225 MAGEC3Q8TD91 643 aa15.71■□□□□ 0.11
CHMP3-203ENST00000409225 CDCP1Q9H5V8 836 aa15.71■□□□□ 0.11
CHMP3-203ENST00000409225 MMP25Q9NPA2 562 aa15.71■□□□□ 0.11
CHMP3-203ENST00000409225 ABHD10Q9NUJ1 306 aa15.71■□□□□ 0.11
CHMP3-203ENST00000409225 HCN3Q9P1Z3 774 aa15.71■□□□□ 0.11
CHMP3-203ENST00000409225 HRH3Q9Y5N1 445 aa15.71■□□□□ 0.11
CHMP3-203ENST00000409225 ABCA4P78363 2273 aa15.7■□□□□ 0.1
CHMP3-203ENST00000409225 TXNDC9O14530 226 aa15.7■□□□□ 0.1
CHMP3-203ENST00000409225 PRMT5O14744 637 aaPredicted RBP15.7■□□□□ 0.1
CHMP3-203ENST00000409225 TFECO14948 347 aaPredicted RBP15.7■□□□□ 0.1
CHMP3-203ENST00000409225 PSMD3O43242 534 aa15.7■□□□□ 0.1
CHMP3-203ENST00000409225 NME2P1O60361 137 aa15.7■□□□□ 0.1
CHMP3-203ENST00000409225 CDC40O60508 579 aaKnown RBP eCLIP15.7■□□□□ 0.1
CHMP3-203ENST00000409225 HOXD4P09016 255 aaPredicted RBP15.7■□□□□ 0.1
CHMP3-203ENST00000409225 NME2P22392 152 aa15.7■□□□□ 0.1
CHMP3-203ENST00000409225 XCR1P46094 333 aa15.7■□□□□ 0.1
CHMP3-203ENST00000409225 HADHBP55084 474 aaKnown RBP15.7■□□□□ 0.1
CHMP3-203ENST00000409225 PRAMEP78395 509 aa15.7■□□□□ 0.1
CHMP3-203ENST00000409225 FAM53BQ14153 422 aa15.7■□□□□ 0.1
CHMP3-203ENST00000409225 SFT2D3Q587I9 215 aa15.7■□□□□ 0.1
CHMP3-203ENST00000409225 PAPD4Q6PIY7 484 aaKnown RBP15.7■□□□□ 0.1
CHMP3-203ENST00000409225 PRSS41Q7RTY9 318 aa15.7■□□□□ 0.1
CHMP3-203ENST00000409225 ADCK2Q7Z695 626 aa15.7■□□□□ 0.1
CHMP3-203ENST00000409225 PLD3Q8IV08 490 aa15.7■□□□□ 0.1
CHMP3-203ENST00000409225 CCDC71Q8IV32 467 aaPredicted RBP15.7■□□□□ 0.1
CHMP3-203ENST00000409225 SMPDL3AQ92484 453 aa15.7■□□□□ 0.1
CHMP3-203ENST00000409225 NINJ1Q92982 152 aa15.7■□□□□ 0.1
CHMP3-203ENST00000409225 ZNF778Q96MU6 729 aa15.7■□□□□ 0.1
CHMP3-203ENST00000409225 PANX3Q96QZ0 392 aa15.7■□□□□ 0.1
CHMP3-203ENST00000409225 OLFM1Q99784 485 aa15.7■□□□□ 0.1
CHMP3-203ENST00000409225 DNAJB12Q9NXW2 375 aaKnown RBP15.7■□□□□ 0.1
CHMP3-203ENST00000409225 TAC3Q9UHF0 121 aa15.7■□□□□ 0.1
CHMP3-203ENST00000409225 ANAPC5Q9UJX4 755 aa15.7■□□□□ 0.1
CHMP3-203ENST00000409225 EFR3BQ9Y2G0 817 aa15.7■□□□□ 0.1
CHMP3-203ENST00000409225 GOLGA6L19H0YKK7 550 aa15.69■□□□□ 0.1
CHMP3-203ENST00000409225 NDC80O14777 642 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms