RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 AVPR1BP47901 424 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 MC1RQ01726 317 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 GRIK2Q13002 908 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 PON3Q15166 354 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 USF2Q15853 346 aaPredicted RBP12.62□□□□□ -0.39
RNF43-201ENST00000407977 TMEM53Q6P2H8 277 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 POMZP3Q6PJE2 187 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 FAM43BQ6ZT52 329 aaPredicted RBP12.62□□□□□ -0.39
RNF43-201ENST00000407977 GPR151Q8TDV0 419 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 GALPQ9UBC7 116 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 CENPBD1B2RD01 187 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 PLD2O14939 933 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 HLA-DQB2P05538 268 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 PET100P0DJ07 73 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 EFNA1P20827 205 aaPredicted RBP12.62□□□□□ -0.39
RNF43-201ENST00000407977 NDUFV1P49821 464 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 RPA4Q13156 261 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 MPP2Q14168 576 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 IQCHQ86VS3 1027 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 SCML4Q8N228 414 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 C2orf73Q8N5S3 287 aaPredicted RBP12.62□□□□□ -0.39
RNF43-201ENST00000407977 SLC22A18Q96BI1 424 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 TMED9Q9BVK6 235 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 PRRG4Q9BZD6 226 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 ZNF350Q9GZX5 532 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 TMEM5Q9Y2B1 443 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 FAM170BA6NMN3 283 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 TMEM233B4DJY2 109 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 PIGGQ5H8A4 983 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 HMBOX1Q6NT76 420 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 CIR1Q86X95 450 aaPredicted RBP12.62□□□□□ -0.39
RNF43-201ENST00000407977 CPA6Q8N4T0 437 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 DENND6BQ8NEG7 585 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 OSTF1Q92882 214 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 GAL3ST3Q96A11 431 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 BARD1Q99728 777 aaKnown RBP12.62□□□□□ -0.39
RNF43-201ENST00000407977 CCDC32Q9BV29 185 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 ASPNQ9BXN1 380 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 B3GNT4Q9C0J1 378 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 CUEDC1Q9NWM3 386 aaPredicted RBP12.62□□□□□ -0.39
RNF43-201ENST00000407977 ST14Q9Y5Y6 855 aa12.62□□□□□ -0.39
RNF43-201ENST00000407977 NIPSNAP2O75323 286 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 IL3P08700 152 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 MATN1P21941 496 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 OR12D2P58182 307 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 ILF3Q12906 894 aaKnown RBP eCLIP12.61□□□□□ -0.392e-6■■■■□ 19.3
RNF43-201ENST00000407977 TMCO2Q7Z6W1 182 aaPredicted RBP12.61□□□□□ -0.39
RNF43-201ENST00000407977 UBQLNLQ8IYU4 475 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 OR13C4Q8NGS5 318 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 ZNF675Q8TD23 568 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 SIGLEC10Q96LC7 697 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 MUS81Q96NY9 551 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 PKP4Q99569 1192 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 TBX5Q99593 518 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 ZNF471Q9BX82 626 aaPredicted RBP12.61□□□□□ -0.39
RNF43-201ENST00000407977 PAK1IP1Q9NWT1 392 aaPredicted RBP12.61□□□□□ -0.39
RNF43-201ENST00000407977 ERVK-11Q9UQG0 969 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 NOP16Q9Y3C1 178 aaKnown RBP12.61□□□□□ -0.39
RNF43-201ENST00000407977 COL5A2P05997 1499 aaPredicted RBP12.61□□□□□ -0.39
RNF43-201ENST00000407977 MYBPHLA2RUH7 354 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 TLX2O43763 284 aaPredicted RBP12.61□□□□□ -0.39
RNF43-201ENST00000407977 APODP05090 189 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 FGF3P11487 239 aaPredicted RBP12.61□□□□□ -0.39
RNF43-201ENST00000407977 IL12BP29460 328 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 MAP2K3P46734 347 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 CLCNKBP51801 687 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 E2F1Q01094 437 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 PRKCDQ05655 676 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 ZNF267Q14586 743 aaPredicted RBP12.61□□□□□ -0.39
RNF43-201ENST00000407977 TMEM199Q8N511 208 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 ANKFN1Q8N957 763 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 PRKYO43930 277 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 RFPL1O75677 317 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 NR2C1P13056 603 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 UGT2B10P36537 528 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 PLA2G16P53816 162 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 SLBPQ14493 270 aaKnown RBP eCLIP12.61□□□□□ -0.39
RNF43-201ENST00000407977 RABL3Q5HYI8 236 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 CLEC12AQ5QGZ9 265 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 SHQ1Q6PI26 577 aaKnown RBP12.61□□□□□ -0.39
RNF43-201ENST00000407977 ZNF598Q86UK7 904 aaKnown RBP12.61□□□□□ -0.39
RNF43-201ENST00000407977 ANKRD13BQ86YJ7 626 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 CPNE2Q96FN4 548 aaPredicted RBP12.61□□□□□ -0.39
RNF43-201ENST00000407977 CDK15Q96Q40 435 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 TMEM246Q9BRR3 403 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 ZNF395Q9H8N7 513 aaPredicted RBP12.61□□□□□ -0.39
RNF43-201ENST00000407977 OSER1Q9NX31 292 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 FCF1Q9Y324 198 aaKnown RBP12.61□□□□□ -0.39
RNF43-201ENST00000407977 AFF1P51825 1210 aaKnown RBP12.61□□□□□ -0.39
RNF43-201ENST00000407977 KCNAB2Q13303 367 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 MYLK3Q32MK0 819 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 MSS51Q4VC12 460 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 LBX2Q6XYB7 198 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 NPAS3Q8IXF0 933 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 PIAS4Q8N2W9 510 aaPredicted RBP12.61□□□□□ -0.39
RNF43-201ENST00000407977 OR4F6Q8NGB9 312 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 LRCH3Q96II8 777 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 EPYCQ99645 322 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 LPIN3Q9BQK8 851 aa12.61□□□□□ -0.39
RNF43-201ENST00000407977 TMEM168Q9H0V1 697 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms