RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 METTL27Q8N6F8 245 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 ANKRD13CQ8N6S4 541 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 RTL3Q8N8U3 475 aaKnown RBP4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 SMRP1Q8NCR6 262 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 ARHGAP45Q92619 1136 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 CFAP36Q96G28 342 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 FAM71F1Q96KD3 344 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 DUX5Q96PT3 197 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 GAL3ST4Q96RP7 486 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 SPXQ9BT56 116 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 THUMPD2Q9BTF0 503 aaKnown RBP4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 POLR3CQ9BUI4 534 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 TRAF4Q9BUZ4 470 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 ZMYND12Q9H0C1 365 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 GAREM1Q9H706 876 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 ZNF701Q9NV72 531 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 PKD2L2Q9NZM6 624 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 RALYQ9UKM9 306 aaKnown RBP4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 DDX19BQ9UMR2 479 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 GPR132Q9UNW8 380 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 CHKBQ9Y259 395 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 WDR83OSQ9Y284 106 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 TMED3Q9Y3Q3 217 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 TTC21AQ8NDW8 1320 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 KIF16BQ96L93 1317 aa4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 CDK12Q9NYV4 1490 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P18-201ENST00000406327 SLIT1O75093 1534 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 A0A1W2PS18 150 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 CTAGE9A4FU28 777 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 CASTOR2A6NHX0 329 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 C4orf47A7E2U8 309 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 TMEM150CB9EJG8 249 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 INO80B-WBP1J3KQ70 363 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 CTDSPLO15194 276 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 PRKRAO75569 313 aaKnown RBP4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 GLCEO94923 617 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 BAG4O95429 457 aaKnown RBP4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 IGHV4-39P01824 125 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 CTAGE8P0CG41 777 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 VCLP18206 1134 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 LBPP18428 481 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 IL10P22301 178 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 CD27P26842 260 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 CALRP27797 417 aaKnown RBP4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 PIK3R1P27986 724 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 USP6P35125 1406 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 THOP1P52888 689 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 GSDMDP57764 484 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 RPL24P83731 157 aaKnown RBP4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 MBTD1Q05BQ5 628 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 LTBQ06643 244 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 IL10RBQ08334 325 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 C17orf67Q0P5P2 114 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 LASP1Q14847 261 aaKnown RBP4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 CCDC142Q17RM4 750 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 KIF19Q2TAC6 998 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 RAB12Q6IQ22 244 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 C9orf47Q6ZRZ4 202 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 SSH2Q76I76 1423 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 GET4Q7L5D6 327 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 C1QL2Q7Z5L3 287 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 SATL1Q86VE3 508 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 ANKRD46Q86W74 232 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 MEX3DQ86XN8 651 aaKnown RBP4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 CCDC83Q8IWF9 413 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 CTAGE4Q8IX94 777 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 CDK20Q8IZL9 346 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 LGI2Q8N0V4 545 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 AMER3Q8N944 861 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 LILRB1Q8NHL6 650 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 FGFBP3Q8TAT2 258 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 SMG7Q92540 1137 aaKnown RBP4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 PYCR2Q96C36 320 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 SGF29Q96ES7 293 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 SCRN2Q96FV2 425 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 CDKN2AIPNLQ96HQ2 116 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 NSL1Q96IY1 281 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 SLC2A11Q9BYW1 496 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 CSTL1Q9H114 145 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 CHMP4BQ9H444 224 aaKnown RBP4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 ACTL8Q9H568 366 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 ZBTB20Q9HC78 741 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 CHST11Q9NPF2 352 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 AKAP7Q9P0M2 348 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 IL19Q9UHD0 177 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 DAPK2Q9UIK4 370 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 MYO5BQ9ULV0 1848 aa4.42□□□□□ -1.7
HMGB3P18-201ENST00000406327 SETD1AO15047 1707 aaKnown RBP4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 PTCH1Q13635 1447 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 IGLV5-45A0A087WSX0 123 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 SAA2-SAA4A0A096LPE2 208 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 C5orf60A6NFR6 353 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 ANKRD61A6NGH8 418 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 F8VVB4 439 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 F8VWA3 439 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 CACNB4O00305 520 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 PIGNO95427 931 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 BMP15O95972 392 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 STAG3L1P0CL83 205 aa4.41□□□□□ -1.7
HMGB3P18-201ENST00000406327 JAK1P23458 1154 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms