RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 CREMQ03060 361 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 NR1D2Q14995 579 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 CATSPEREQ5SY80 951 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 DEFB128Q7Z7B8 93 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 ADIPOR2Q86V24 386 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 OR2A12Q8NGT7 310 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 NELL1Q92832 810 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 RPL3LQ92901 407 aaKnown RBP9.51□□□□□ -0.89
MSH2-202ENST00000406134 GABARAPL3Q9BY60 117 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 BRD9Q9H8M2 597 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 PRDM8Q9NQV8 689 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 SLC6A14Q9UN76 642 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 SNX6Q9UNH7 406 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 AP3M1Q9Y2T2 418 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 COQ6Q9Y2Z9 468 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 OR2A25A4D2G3 310 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 GABRR3A8MPY1 467 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 SPINT1O43278 529 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 DNAJB5O75953 348 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 RECQL5O94762 991 aaPredicted RBP9.51□□□□□ -0.89
MSH2-202ENST00000406134 BMP4P12644 408 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 GABRB1P18505 474 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 ALDH4A1P30038 563 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 PXNP49023 591 aaPredicted RBP9.51□□□□□ -0.89
MSH2-202ENST00000406134 CCR3P51677 355 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 CXCR4P61073 352 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 CHIT1Q13231 466 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 SP140Q13342 867 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 PLEKHS1Q5SXH7 462 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 HENMT1Q5T8I9 393 aaKnown RBP9.51□□□□□ -0.89
MSH2-202ENST00000406134 EIF3MQ7L2H7 374 aaKnown RBP9.51□□□□□ -0.89
MSH2-202ENST00000406134 CCDC103Q8IW40 242 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 OR4C15Q8NGM1 316 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 DNASE1L2Q92874 299 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 MAGED4Q96JG8 741 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 ZNF347Q96SE7 839 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 SLC46A2Q9BY10 475 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 ELOVL6Q9H5J4 265 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 TBC1D23Q9NUY8 699 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 SAMD4AQ9UPU9 718 aaKnown RBP9.51□□□□□ -0.89
MSH2-202ENST00000406134 TTC34A8MYJ7 566 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 M0R082 166 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 LEFTY2O00292 366 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 TOR1BO14657 336 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 SCAMP2O15127 329 aaKnown RBP9.51□□□□□ -0.89
MSH2-202ENST00000406134 SLC16A5O15375 505 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 ALDH1A1P00352 501 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 GSTM1P09488 218 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 GABRR2P28476 465 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 GRK5P34947 590 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 KIR3DL1P43629 444 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 TRPC1P48995 793 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 BCAP31P51572 246 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 VBP1P61758 197 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 DEFB103AP81534 67 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 CSTF3Q12996 717 aaKnown RBP9.51□□□□□ -0.89
MSH2-202ENST00000406134 TOP3AQ13472 1001 aaPredicted RBP9.51□□□□□ -0.89
MSH2-202ENST00000406134 DOC2AQ14183 400 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 CLCA4Q14CN2 919 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 NPTX1Q15818 432 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 COX20Q5RI15 118 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 ZCCHC8Q6NZY4 707 aaKnown RBP9.51□□□□□ -0.89
MSH2-202ENST00000406134 TCAIMQ8N3R3 496 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 MRGPRX3Q96LB0 322 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 FBXO8Q9NRD0 319 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 DOLKQ9UPQ8 538 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 A0A1W2PQ67 120 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 WASH3PC4AMC7 463 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 PRRG1O14668 218 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 TGM5O43548 720 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 PQBP1O60828 265 aaKnown RBP9.5□□□□□ -0.89
MSH2-202ENST00000406134 MOSPD3O75425 235 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 ZNF682O95780 498 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 FPR1P21462 350 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 TGM1P22735 817 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 HPCAL1P37235 193 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 RPS3AP61247 264 aaKnown RBP9.5□□□□□ -0.89
MSH2-202ENST00000406134 NCS1P62166 190 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 EEF1A2Q05639 463 aaKnown RBP9.5□□□□□ -0.89
MSH2-202ENST00000406134 MPPE1Q53F39 396 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 TMEM236Q5W0B7 351 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 Q6ZVU0 165 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 NEK10Q6ZWH5 1172 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 TMEM25Q86YD3 366 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 ELMOD1Q8N336 334 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 SH3KBP1Q96B97 665 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 MTERF1Q99551 399 aaKnown RBP9.5□□□□□ -0.89
MSH2-202ENST00000406134 MROQ9BYG7 248 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 RIBC2Q9H4K1 309 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 ZDHHC6Q9H6R6 413 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 DNAJC11Q9NVH1 559 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 OSGIN1Q9UJX0 560 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 ABT1Q9ULW3 272 aaKnown RBP9.5□□□□□ -0.89
MSH2-202ENST00000406134 HSPE1-MOB4S4R3N1 261 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 DOCK9Q9BZ29 2069 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 H0YIV9 168 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 GNGT2O14610 69 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 SOD1P00441 154 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 FABP3P05413 133 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 PORP16435 677 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms