RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 KATNA1O75449 491 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 WDR47O94967 919 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 NELFEP18615 380 aaKnown RBP10.13□□□□□ -0.79
RPAIN-204ENST00000405578 GNAZP19086 355 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 GGT5P36269 586 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 GMPRP36959 345 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 ETV5P41161 510 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 RAB15P59190 212 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 PPP1CAP62136 330 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 PTCHD3Q3KNS1 767 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 ZC3H12BQ5HYM0 836 aaKnown RBP10.13□□□□□ -0.79
RPAIN-204ENST00000405578 LCTLQ6UWM7 567 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 LRRC70Q7Z2Q7 622 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 TMPRSS9Q7Z410 1059 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 TRIM73Q86UV7 250 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 THOC6Q86W42 341 aaKnown RBP10.13□□□□□ -0.79
RPAIN-204ENST00000405578 BPHLQ86WA6 291 aaPredicted RBP10.13□□□□□ -0.79
RPAIN-204ENST00000405578 C19orf47Q8N9M1 422 aaKnown RBP10.13□□□□□ -0.79
RPAIN-204ENST00000405578 SNX31Q8N9S9 440 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 OR2A1Q8NGT9 310 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 RDH11Q8TC12 318 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 PYCR2Q96C36 320 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 SLC41A2Q96JW4 573 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 TRAPPC9Q96Q05 1148 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 NRTNQ99748 197 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 CD244Q9BZW8 370 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 SSU72Q9NP77 194 aaKnown RBP10.13□□□□□ -0.79
RPAIN-204ENST00000405578 ZNF71Q9NQZ8 489 aaPredicted RBP10.13□□□□□ -0.79
RPAIN-204ENST00000405578 DNAJC11Q9NVH1 559 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 ZNF358Q9NW07 568 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 MKS1Q9NXB0 559 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 TMEM216Q9P0N5 145 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 OPTCQ9UBM4 332 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 PTBP2Q9UKA9 531 aaKnown RBP10.13□□□□□ -0.79
RPAIN-204ENST00000405578 SLC22A14Q9Y267 594 aa10.13□□□□□ -0.79
RPAIN-204ENST00000405578 RP1L1Q8IWN7 2480 aaPredicted RBP10.13□□□□□ -0.79
RPAIN-204ENST00000405578 A0A1W2PPV9 198 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 EFCAB7A8K855 629 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 B4E171 279 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 STX16-NPEPL1H3BU86 382 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 K7EPI3 171 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 STX16O14662 325 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 CLGNO14967 610 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 CCNT2O60583 730 aaKnown RBP10.12□□□□□ -0.79
RPAIN-204ENST00000405578 H2AFYO75367 372 aaKnown RBP10.12□□□□□ -0.79
RPAIN-204ENST00000405578 MYL2P10916 166 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 ST6GAL1P15907 406 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 EPB42P16452 691 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 MAGP20916 626 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 ATP5F1P24539 256 aaPredicted RBP10.12□□□□□ -0.79
RPAIN-204ENST00000405578 CXCR2P25025 360 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 PSMB5P28074 263 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 PEBP1P30086 187 aaKnown RBP10.12□□□□□ -0.79
RPAIN-204ENST00000405578 TSPAN7P41732 249 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 SLC6A12P48065 614 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 KCNC1P48547 511 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 HSPA7P48741 367 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 CCR8P51685 355 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 MAPK10P53779 464 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 NAA20P61599 178 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 FOXM1Q08050 763 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 ASPHQ12797 758 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 CDC16Q13042 620 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 IL11RAQ14626 422 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 SETDB1Q15047 1291 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 PDK4Q16654 411 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 C16orf46Q6P387 395 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 FIGLAQ6QHK4 219 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 SH2D5Q6ZV89 423 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 DTX1Q86Y01 620 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 KLHDC8AQ8IYD2 350 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 LRRC56Q8IYG6 542 aaPredicted RBP10.12□□□□□ -0.79
RPAIN-204ENST00000405578 D2HGDHQ8N465 521 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 PTGR2Q8N8N7 351 aaPredicted RBP10.12□□□□□ -0.79
RPAIN-204ENST00000405578 BANPQ8N9N5 519 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 OR8K5Q8NH50 307 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 FLVCR1-AS1Q8TAF5 88 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 PPP4R1Q8TF05 950 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 UBTD2Q8WUN7 234 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 SLC5A11Q8WWX8 675 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 USP7Q93009 1102 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 MIB2Q96AX9 1013 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 PHF21BQ96EK2 531 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 DPH7Q9BTV6 452 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 ASPSCR1Q9BZE9 553 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 TWSG1Q9GZX9 223 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 CHRNA10Q9GZZ6 450 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 TMEM184CQ9NVA4 438 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 GPRC5BQ9NZH0 403 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 TUBD1Q9UJT1 453 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 BTRCQ9Y297 605 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 PLLPQ9Y342 182 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 KLK4Q9Y5K2 254 aa10.12□□□□□ -0.79
RPAIN-204ENST00000405578 FOXO6A8MYZ6 492 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 C9orf172C9J069 976 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 POLR1CO15160 346 aaPredicted RBP10.11□□□□□ -0.79
RPAIN-204ENST00000405578 TAPBPO15533 448 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 KLK8O60259 260 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 PLIN3O60664 434 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 SPAG7O75391 227 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms