RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 TSPAN12O95859 305 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 AHSGP02765 367 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 STATHP02808 62 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 ANXA5P08758 320 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 COX6A1P12074 109 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 SLC26A3P40879 764 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 ELK3P41970 407 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 DR1Q01658 176 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 HIF1AQ16665 826 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 HP1BP3Q5SSJ5 553 aaPredicted RBP14.6□□□□□ -0.07
TPM1-207ENST00000403994 AGAP7PQ5VUJ5 663 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 IRAK1BP1Q5VVH5 260 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 STEAP4Q687X5 459 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 PAQR3Q6TCH7 311 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 IGFL2Q6UWQ7 119 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 SYDE1Q6ZW31 735 aaPredicted RBP14.6□□□□□ -0.07
TPM1-207ENST00000403994 VN1R4Q7Z5H5 301 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 CREG2Q8IUH2 290 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 ZC3H7AQ8IWR0 971 aaKnown RBP14.6□□□□□ -0.07
TPM1-207ENST00000403994 KLHL7Q8IXQ5 586 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 PARP9Q8IXQ6 854 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 PDIK1LQ8N165 341 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 MYO1HQ8N1T3 1032 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 MCOLN3Q8TDD5 553 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 MMABQ96EY8 250 aaPredicted RBP14.6□□□□□ -0.07
TPM1-207ENST00000403994 THOC3Q96J01 351 aaKnown RBP14.6□□□□□ -0.07
TPM1-207ENST00000403994 CCDC138Q96M89 665 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 PWWP2AQ96N64 755 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 PRAP1Q96NZ9 151 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 AGAP4Q96P64 663 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 PSMG3-AS1Q96PY0 264 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 PARVBQ9HBI1 364 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 ZNF160Q9HCG1 818 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 MKKSQ9NPJ1 570 aaPredicted RBP14.6□□□□□ -0.07
TPM1-207ENST00000403994 NOVA2Q9UNW9 492 aaKnown RBP14.6□□□□□ -0.07
TPM1-207ENST00000403994 MRPS2Q9Y399 296 aaKnown RBP14.6□□□□□ -0.07
TPM1-207ENST00000403994 BLACEA4D250 179 aa14.59□□□□□ -0.07
TPM1-207ENST00000403994 TXNDC9O14530 226 aa14.59□□□□□ -0.07
TPM1-207ENST00000403994 AGFG2O95081 481 aa14.59□□□□□ -0.07
TPM1-207ENST00000403994 FDXRP22570 491 aa14.59□□□□□ -0.07
TPM1-207ENST00000403994 RPS15AP62244 130 aaKnown RBP14.59□□□□□ -0.07
TPM1-207ENST00000403994 EEF1A2Q05639 463 aaKnown RBP14.59□□□□□ -0.07
TPM1-207ENST00000403994 CRB2Q5IJ48 1285 aa14.59□□□□□ -0.07
TPM1-207ENST00000403994 FHL5Q5TD97 284 aa14.59□□□□□ -0.07
TPM1-207ENST00000403994 ATG9BQ674R7 924 aa14.59□□□□□ -0.07
TPM1-207ENST00000403994 HIBCHQ6NVY1 386 aaPredicted RBP14.59□□□□□ -0.07
TPM1-207ENST00000403994 TRMT10BQ6PF06 316 aaKnown RBP14.59□□□□□ -0.07
TPM1-207ENST00000403994 AGTRAPQ6RW13 159 aa14.59□□□□□ -0.07
TPM1-207ENST00000403994 LAPTM4BQ86VI4 370 aa14.59□□□□□ -0.07
TPM1-207ENST00000403994 CISD2Q8N5K1 135 aaKnown RBP14.59□□□□□ -0.07
TPM1-207ENST00000403994 SGPP1Q9BX95 441 aa14.59□□□□□ -0.07
TPM1-207ENST00000403994 TGIF2Q9GZN2 237 aa14.59□□□□□ -0.07
TPM1-207ENST00000403994 PCBD2Q9H0N5 130 aa14.59□□□□□ -0.07
TPM1-207ENST00000403994 ATG10Q9H0Y0 220 aa14.59□□□□□ -0.07
TPM1-207ENST00000403994 PPANQ9NQ55 473 aaKnown RBP14.59□□□□□ -0.07
TPM1-207ENST00000403994 ASF1BQ9NVP2 202 aa14.59□□□□□ -0.07
TPM1-207ENST00000403994 CORO1CQ9ULV4 474 aaPredicted RBP14.59□□□□□ -0.07
TPM1-207ENST00000403994 CELSR2Q9HCU4 2923 aa14.59□□□□□ -0.07
TPM1-207ENST00000403994 TP73O15350 636 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 SLC16A5O15375 505 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 TTI1O43156 1089 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 SEMA7AO75326 666 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 SEC31AO94979 1220 aaKnown RBP14.58□□□□□ -0.08
TPM1-207ENST00000403994 CDH1P12830 882 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 GP1BBP13224 206 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 HRH2P25021 359 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 BCL6P41182 706 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 EFNA3P52797 238 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 PGGT1BP53609 377 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 ITGA8P53708 1063 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 GNG11P61952 73 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 PDAP1Q13442 181 aaKnown RBP14.58□□□□□ -0.08
TPM1-207ENST00000403994 FAM53BQ14153 422 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 NR6A1Q15406 480 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 SYT16Q17RD7 645 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 TEDDM1Q5T9Z0 273 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 HECTD2Q5U5R9 776 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 PRSS41Q7RTY9 318 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 C17orf64Q86WR6 236 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 PALM2Q8IXS6 379 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 GPATCH11Q8N954 259 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 LRRC39Q96DD0 335 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 RUNDC3BQ96NL0 473 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 NAPGQ99747 312 aaPredicted RBP14.58□□□□□ -0.08
TPM1-207ENST00000403994 OLFM1Q99784 485 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 YIPF2Q9BWQ6 316 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 EPS8L2Q9H6S3 715 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 TMEM184CQ9NVA4 438 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 NTNG1Q9Y2I2 539 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 TEX264Q9Y6I9 313 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 POLEQ07864 2286 aa14.58□□□□□ -0.08
TPM1-207ENST00000403994 ITPR2Q14571 2701 aa14.57□□□□□ -0.08
TPM1-207ENST00000403994 KCNE1BA0A087WTH5 132 aa14.57□□□□□ -0.08
TPM1-207ENST00000403994 IGHV1-45A0A0A0MS14 117 aa14.57□□□□□ -0.08
TPM1-207ENST00000403994 NSG1A0A0A6YYJ2 146 aa14.57□□□□□ -0.08
TPM1-207ENST00000403994 FANCGO15287 622 aa14.57□□□□□ -0.08
TPM1-207ENST00000403994 HEXBP07686 556 aa14.57□□□□□ -0.08
TPM1-207ENST00000403994 PRR35P0CG20 571 aa14.57□□□□□ -0.08
TPM1-207ENST00000403994 RNF224P0DH78 156 aa14.57□□□□□ -0.08
TPM1-207ENST00000403994 CCND1P24385 295 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms