RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 ERVK-10P10266 1014 aa11.2□□□□□ -0.62
SPTLC1P3-201ENST00000403408 ERGP11308 486 aa11.2□□□□□ -0.62
SPTLC1P3-201ENST00000403408 RFC3P40938 356 aa11.2□□□□□ -0.62
SPTLC1P3-201ENST00000403408 HADHBP55084 474 aaKnown RBP11.2□□□□□ -0.62
SPTLC1P3-201ENST00000403408 DLX5P56178 289 aa11.2□□□□□ -0.62
SPTLC1P3-201ENST00000403408 ACVR1Q04771 509 aa11.2□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PARP6Q2NL67 630 aa11.2□□□□□ -0.62
SPTLC1P3-201ENST00000403408 SLC25A25Q6KCM7 469 aa11.2□□□□□ -0.62
SPTLC1P3-201ENST00000403408 CD163Q86VB7 1156 aa11.2□□□□□ -0.62
SPTLC1P3-201ENST00000403408 TMEM200AQ86VY9 491 aa11.2□□□□□ -0.62
SPTLC1P3-201ENST00000403408 RAD51AP1Q96B01 352 aa11.2□□□□□ -0.62
SPTLC1P3-201ENST00000403408 IQCDQ96DY2 449 aa11.2□□□□□ -0.62
SPTLC1P3-201ENST00000403408 MACROD1Q9BQ69 325 aa11.2□□□□□ -0.62
SPTLC1P3-201ENST00000403408 UTP23Q9BRU9 249 aaKnown RBP11.2□□□□□ -0.62
SPTLC1P3-201ENST00000403408 OSBPL8Q9BZF1 889 aa11.2□□□□□ -0.62
SPTLC1P3-201ENST00000403408 P2RY12Q9H244 342 aa11.2□□□□□ -0.62
SPTLC1P3-201ENST00000403408 KCNK13Q9HB14 408 aa11.2□□□□□ -0.62
SPTLC1P3-201ENST00000403408 TSR3Q9UJK0 312 aaKnown RBP11.2□□□□□ -0.62
SPTLC1P3-201ENST00000403408 CDC14AQ9UNH5 594 aa11.2□□□□□ -0.62
SPTLC1P3-201ENST00000403408 A0A1B0GTH9 108 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 MACROD2A1Z1Q3 448 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PRRG2O14669 202 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 HAT1O14929 419 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 DNAJB6O75190 326 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 TSPAN12O95859 305 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 RPN2P04844 631 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 HOXD4P09016 255 aaPredicted RBP11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 MEP1AQ16819 746 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 TSTD2Q5T7W7 516 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 VN1R4Q7Z5H5 301 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 KIF2BQ8N4N8 673 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 FAM71DQ8N9W8 422 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 OR4L1Q8NH43 312 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 FAM57AQ8TBR7 257 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 TSLPQ969D9 159 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 ZNF559Q9BR84 538 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 DRC3Q9H069 523 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 LRRC40Q9H9A6 602 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 MMP25Q9NPA2 562 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 ABHD10Q9NUJ1 306 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 GALPQ9UBC7 116 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 TEKT2Q9UIF3 430 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 GNPTGQ9UJJ9 305 aa11.19□□□□□ -0.62
SPTLC1P3-201ENST00000403408 EML6Q6ZMW3 1958 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 TMEM200CA6NKL6 621 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 ARHGEF33A8MVX0 844 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 NME2P1O60361 137 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 FAM155BO75949 473 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 APOA4P06727 396 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 ANXA5P08758 320 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 MYBL2P10244 700 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 CD46P15529 392 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 NME2P22392 152 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 CMPK1P30085 196 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 SNTB1Q13884 538 aaKnown RBP11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 GBX1Q14549 363 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 CEBPEQ15744 281 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 MAPKAPK3Q16644 382 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 MINDY4Q4G0A6 757 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 CMPK2Q5EBM0 449 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 CTSL3PQ5NE16 218 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 GARNL3Q5VVW2 1013 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 AFTPHQ6ULP2 937 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 Q71RC1 249 aaPredicted RBP11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PDSS2Q86YH6 399 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PPFIBP2Q8ND30 876 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 M1APQ8TC57 530 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 ALG3Q92685 438 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 MDFIQ99750 246 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 OLFM1Q99784 485 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 RAB11FIP5Q9BXF6 653 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 CDCP1Q9H5V8 836 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 MRPS30Q9NP92 439 aaKnown RBP11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 HCN3Q9P1Z3 774 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 LRFN1Q9P244 771 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 KCNN3Q9UGI6 736 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PCYOX1Q9UHG3 505 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 INTUQ9ULD6 942 aa11.18□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PRMT5O14744 637 aaPredicted RBP11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 SLC25A12O75746 678 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 MATN4O95460 622 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 TPOP07202 933 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 DRD2P14416 443 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 ZNF24P17028 368 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 IL1RNP18510 177 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 TPP2P29144 1249 aaPredicted RBP11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 CTNNA1P35221 906 aaKnown RBP11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PTPN7P35236 360 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PTGS2P35354 604 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 NUP107P57740 925 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 AP2B1P63010 937 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 ADAM8P78325 824 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 RHAGQ02094 409 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 OC90Q02509 493 aaPredicted RBP11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 FAM53BQ14153 422 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 SFT2D3Q587I9 215 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 CCDC181Q5TID7 509 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PAPD4Q6PIY7 484 aaKnown RBP11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 TMEM178AQ8NBL3 297 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 OR6P1Q8NGX9 317 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms