RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 NPPAP01160 153 aa12.79□□□□□ -0.36
CEACAM1-206ENST00000403136 IL6P05231 212 aa12.79□□□□□ -0.36
CEACAM1-206ENST00000403136 BLKP51451 505 aa12.79□□□□□ -0.36
CEACAM1-206ENST00000403136 RPL6Q02878 288 aaKnown RBP12.79□□□□□ -0.36
CEACAM1-206ENST00000403136 NFYCQ13952 458 aa12.79□□□□□ -0.36
CEACAM1-206ENST00000403136 AMIGO1Q86WK6 493 aa12.79□□□□□ -0.36
CEACAM1-206ENST00000403136 DPP10Q8N608 796 aa12.79□□□□□ -0.36
CEACAM1-206ENST00000403136 OR4E2Q8NGC2 313 aa12.79□□□□□ -0.36
CEACAM1-206ENST00000403136 LCN9Q8WX39 176 aa12.79□□□□□ -0.36
CEACAM1-206ENST00000403136 CCDC124Q96CT7 223 aaKnown RBP12.79□□□□□ -0.36
CEACAM1-206ENST00000403136 TSSK3Q96PN8 268 aa12.79□□□□□ -0.36
CEACAM1-206ENST00000403136 PITHD1Q9GZP4 211 aaPredicted RBP12.79□□□□□ -0.36
CEACAM1-206ENST00000403136 RHBGQ9H310 441 aa12.79□□□□□ -0.36
CEACAM1-206ENST00000403136 TAAR2Q9P1P5 351 aa12.79□□□□□ -0.36
CEACAM1-206ENST00000403136 ADGRE2Q9UHX3 823 aa12.79□□□□□ -0.36
CEACAM1-206ENST00000403136 PPT2Q9UMR5 302 aa12.79□□□□□ -0.36
CEACAM1-206ENST00000403136 A0A1W2PR77 199 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 FXYD1O00168 92 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 TRIM38O00635 465 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 LMNAP02545 664 aaKnown RBP12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 WNT1P04628 370 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 CTSEP14091 401 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 PTX3P26022 381 aaPredicted RBP12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 MAOBP27338 520 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 CD38P28907 300 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 SHMT2P34897 504 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 RAE1P78406 368 aaKnown RBP12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 PHEXP78562 749 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 ABATP80404 500 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 FOXM1Q08050 763 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 FAM174BQ3ZCQ3 159 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 SPIN4Q56A73 249 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 PRMT9Q6P2P2 845 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 SLC2A7Q6PXP3 512 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 SLC36A4Q6YBV0 504 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 VN1R5Q7Z5H4 357 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 PARGQ86W56 976 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 C1orf52Q8N6N3 182 aaKnown RBP12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 RNF148Q8N7C7 305 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 ZFPM2Q8WW38 1151 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 EGLN2Q96KS0 407 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 TMEM74Q96NL1 305 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 SLC39A3Q9BRY0 314 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 OR51B5Q9H339 312 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 DCLRE1BQ9H816 532 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 SIRT5Q9NXA8 310 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 OR6C2Q9NZP2 312 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 SLAMF8Q9P0V8 285 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 CD300AQ9UGN4 299 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 PCM1Q15154 2024 aa12.78□□□□□ -0.36
CEACAM1-206ENST00000403136 ANKDD1BA6NHY2 528 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 PGRP06401 933 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 XRCC1P18887 633 aaPredicted RBP12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 PRPS1L1P21108 318 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 SLC6A2P23975 617 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 MSX2P35548 267 aaPredicted RBP12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 CLNS1AP54105 237 aaKnown RBP12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 RACK1P63244 317 aaKnown RBP12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 CSNK1G2P78368 415 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 REEP5Q00765 189 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 CAPRIN1Q14444 709 aaKnown RBP12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 SF1Q15637 639 aaKnown RBP12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 SPANXN4Q5MJ08 99 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 SAMD4BQ5PRF9 694 aaKnown RBP12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 GALNT18Q6P9A2 607 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 MAMSTRQ6ZN01 415 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 TAF8Q7Z7C8 310 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 IQCHQ86VS3 1027 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 SYT12Q8IV01 421 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 RIMKLAQ8IXN7 391 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 SLC15A3Q8IY34 581 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 JPH3Q8WXH2 748 aaPredicted RBP12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 STMN2Q93045 179 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 SPACA7Q96KW9 195 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 IER2Q9BTL4 223 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 EBPLQ9BY08 206 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 RNPEPL1Q9HAU8 725 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 CD320Q9NPF0 282 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 SPHK1Q9NYA1 384 aa12.77□□□□□ -0.36
CEACAM1-206ENST00000403136 KNL1Q8NG31 2342 aa12.77□□□□□ -0.37
CEACAM1-206ENST00000403136 IGKV1-8A0A0C4DH67 115 aa12.76□□□□□ -0.37
CEACAM1-206ENST00000403136 FEZF1A0PJY2 475 aa12.76□□□□□ -0.37
CEACAM1-206ENST00000403136 PRORSD1PA6NEY8 169 aa12.76□□□□□ -0.37
CEACAM1-206ENST00000403136 OR5K4A6NMS3 321 aa12.76□□□□□ -0.37
CEACAM1-206ENST00000403136 TLR4O00206 839 aa12.76□□□□□ -0.37
CEACAM1-206ENST00000403136 MAP3K13O43283 966 aa12.76□□□□□ -0.37
CEACAM1-206ENST00000403136 PRMT3O60678 531 aa12.76□□□□□ -0.37
CEACAM1-206ENST00000403136 PSMG1O95456 288 aa12.76□□□□□ -0.37
CEACAM1-206ENST00000403136 ANXA4P09525 319 aaPredicted RBP12.76□□□□□ -0.37
CEACAM1-206ENST00000403136 JUNDP17535 347 aa12.76□□□□□ -0.37
CEACAM1-206ENST00000403136 PEBP1P30086 187 aaKnown RBP12.76□□□□□ -0.37
CEACAM1-206ENST00000403136 SLC7A2P52569 658 aa12.76□□□□□ -0.37
CEACAM1-206ENST00000403136 MS4A2Q01362 244 aa12.76□□□□□ -0.37
CEACAM1-206ENST00000403136 C1orf61Q13536 156 aa12.76□□□□□ -0.37
CEACAM1-206ENST00000403136 MAPKAPK3Q16644 382 aa12.76□□□□□ -0.37
CEACAM1-206ENST00000403136 DLEU7Q6UYE1 221 aa12.76□□□□□ -0.37
CEACAM1-206ENST00000403136 ARMCX6Q7L4S7 300 aa12.76□□□□□ -0.37
CEACAM1-206ENST00000403136 ENDOVQ8N8Q3 282 aaKnown RBP12.76□□□□□ -0.37
CEACAM1-206ENST00000403136 ANKRD53Q8N9V6 530 aa12.76□□□□□ -0.37
CEACAM1-206ENST00000403136 GPR156Q8NFN8 814 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms