RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 CNTFP26441 200 aa18.33■□□□□ 0.52
RTN4-207ENST00000402434 CCR8P51685 355 aa18.33■□□□□ 0.52
RTN4-207ENST00000402434 RPS18P62269 152 aaKnown RBP18.33■□□□□ 0.52
RTN4-207ENST00000402434 COL9A2Q14055 689 aaPredicted RBP18.33■□□□□ 0.52
RTN4-207ENST00000402434 SLC29A2Q14542 456 aa18.33■□□□□ 0.52
RTN4-207ENST00000402434 GSPT2Q8IYD1 628 aaKnown RBP18.33■□□□□ 0.52
RTN4-207ENST00000402434 TCAIMQ8N3R3 496 aa18.33■□□□□ 0.52
RTN4-207ENST00000402434 ARHGEF39Q8N4T4 335 aa18.33■□□□□ 0.52
RTN4-207ENST00000402434 CSNK1A1LQ8N752 337 aa18.33■□□□□ 0.52
RTN4-207ENST00000402434 PDPRQ8NCN5 879 aa18.33■□□□□ 0.52
RTN4-207ENST00000402434 RERGQ96A58 199 aaPredicted RBP18.33■□□□□ 0.52
RTN4-207ENST00000402434 ALG9Q9H6U8 611 aa18.33■□□□□ 0.52
RTN4-207ENST00000402434 PTBP2Q9UKA9 531 aaKnown RBP18.33■□□□□ 0.52
RTN4-207ENST00000402434 KCNE2Q9Y6J6 123 aa18.33■□□□□ 0.52
RTN4-207ENST00000402434 EXOC1LA0A1B0GW35 172 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 NCF1BA6NI72 391 aaPredicted RBP18.32■□□□□ 0.52
RTN4-207ENST00000402434 NCF1CA8MVU1 366 aaPredicted RBP18.32■□□□□ 0.52
RTN4-207ENST00000402434 ATXN7O15265 892 aaPredicted RBP18.32■□□□□ 0.52
RTN4-207ENST00000402434 TAPBPO15533 448 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 KLF7O75840 302 aaPredicted RBP18.32■□□□□ 0.52
RTN4-207ENST00000402434 MED26O95402 600 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 CD63P08962 238 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 PRKAR1AP10644 381 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 NCF1P14598 390 aaPredicted RBP18.32■□□□□ 0.52
RTN4-207ENST00000402434 NFKB2Q00653 900 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 IRF9Q00978 393 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 ERV3-1Q14264 604 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 TBR1Q16650 682 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 FAM83EQ2M2I3 478 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 MUM1Q2TAK8 710 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 C18orf21Q32NC0 220 aaPredicted RBP18.32■□□□□ 0.52
RTN4-207ENST00000402434 GARNL3Q5VVW2 1013 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 SULT1C3Q6IMI6 304 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 MRPL14Q6P1L8 145 aaKnown RBP18.32■□□□□ 0.52
RTN4-207ENST00000402434 C16orf46Q6P387 395 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 TAOK1Q7L7X3 1001 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 VN1R4Q7Z5H5 301 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 RHEBL1Q8TAI7 183 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 KCTD4Q8WVF5 259 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 SLC5A11Q8WWX8 675 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 C10orf90Q96M02 699 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 GPR78Q96P69 363 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 ATOH8Q96SQ7 321 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 IFT80Q9P2H3 777 aaPredicted RBP18.32■□□□□ 0.52
RTN4-207ENST00000402434 FETUBQ9UGM5 382 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 RNF112Q9ULX5 631 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 RUVBL1Q9Y265 456 aaKnown RBP18.32■□□□□ 0.52
RTN4-207ENST00000402434 ATRXP46100 2492 aa18.32■□□□□ 0.52
RTN4-207ENST00000402434 PIEZO2Q9H5I5 2752 aa18.31■□□□□ 0.52
RTN4-207ENST00000402434 LCMT2O60294 686 aaKnown RBP18.31■□□□□ 0.52
RTN4-207ENST00000402434 KERAO60938 352 aa18.31■□□□□ 0.52
RTN4-207ENST00000402434 IPO13O94829 963 aaKnown RBP18.31■□□□□ 0.52
RTN4-207ENST00000402434 KLHL2O95198 593 aa18.31■□□□□ 0.52
RTN4-207ENST00000402434 FURINP09958 794 aa18.31■□□□□ 0.52
RTN4-207ENST00000402434 GCAP28676 217 aa18.31■□□□□ 0.52
RTN4-207ENST00000402434 GRK3P35626 688 aa18.31■□□□□ 0.52
RTN4-207ENST00000402434 GDF5P43026 501 aa18.31■□□□□ 0.52
RTN4-207ENST00000402434 UGT8Q16880 541 aa18.31■□□□□ 0.52
RTN4-207ENST00000402434 HKDC1Q2TB90 917 aa18.31■□□□□ 0.52
RTN4-207ENST00000402434 LINC00303Q3SY05 128 aa18.31■□□□□ 0.52
RTN4-207ENST00000402434 TAF1BQ53T94 588 aaPredicted RBP18.31■□□□□ 0.52
RTN4-207ENST00000402434 CATSPEREQ5SY80 951 aa18.31■□□□□ 0.52
RTN4-207ENST00000402434 ATP1A1-AS1Q5TC04 95 aa18.31■□□□□ 0.52
RTN4-207ENST00000402434 ADGRD1Q6QNK2 874 aa18.31■□□□□ 0.52
RTN4-207ENST00000402434 EXTL1Q92935 676 aa18.31■□□□□ 0.52
RTN4-207ENST00000402434 FKBP10Q96AY3 582 aa18.31■□□□□ 0.52
RTN4-207ENST00000402434 TM4SF19Q96DZ7 209 aa18.31■□□□□ 0.52
RTN4-207ENST00000402434 BBC3Q96PG8 261 aaPredicted RBP18.31■□□□□ 0.52
RTN4-207ENST00000402434 TMEM79Q9BSE2 394 aa18.31■□□□□ 0.52
RTN4-207ENST00000402434 CD274Q9NZQ7 290 aa18.31■□□□□ 0.52
RTN4-207ENST00000402434 NDOR1Q9UHB4 597 aa18.31■□□□□ 0.52
RTN4-207ENST00000402434 FEZF1A0PJY2 475 aa18.3■□□□□ 0.52
RTN4-207ENST00000402434 P2RX6O15547 441 aa18.3■□□□□ 0.52
RTN4-207ENST00000402434 ALBP02768 609 aa18.3■□□□□ 0.52
RTN4-207ENST00000402434 PIM1P11309 404 aaPredicted RBP18.3■□□□□ 0.52
RTN4-207ENST00000402434 BCL6P41182 706 aa18.3■□□□□ 0.52
RTN4-207ENST00000402434 ACAP2Q15057 778 aa18.3■□□□□ 0.52
RTN4-207ENST00000402434 SOWAHCQ53LP3 525 aaPredicted RBP18.3■□□□□ 0.52
RTN4-207ENST00000402434 MLIPQ5VWP3 458 aa18.3■□□□□ 0.52
RTN4-207ENST00000402434 PRMT9Q6P2P2 845 aa18.3■□□□□ 0.52
RTN4-207ENST00000402434 OVCH1Q7RTY7 1134 aa18.3■□□□□ 0.52
RTN4-207ENST00000402434 ADAMTS17Q8TE56 1095 aa18.3■□□□□ 0.52
RTN4-207ENST00000402434 MVB12AQ96EY5 273 aa18.3■□□□□ 0.52
RTN4-207ENST00000402434 CABS1Q96KC9 395 aa18.3■□□□□ 0.52
RTN4-207ENST00000402434 SLC26A1Q9H2B4 701 aa18.3■□□□□ 0.52
RTN4-207ENST00000402434 CNOT10Q9H9A5 744 aaKnown RBP18.3■□□□□ 0.52
RTN4-207ENST00000402434 PELI2Q9HAT8 420 aa18.3■□□□□ 0.52
RTN4-207ENST00000402434 PADI2Q9Y2J8 665 aa18.3■□□□□ 0.52
RTN4-207ENST00000402434 DYRK1BQ9Y463 629 aa18.3■□□□□ 0.52
RTN4-207ENST00000402434 CCDC88CQ9P219 2028 aa18.29■□□□□ 0.52
RTN4-207ENST00000402434 TRBC2A0A5B9 178 aa18.29■□□□□ 0.52
RTN4-207ENST00000402434 CNOT3O75175 753 aaKnown RBP18.29■□□□□ 0.52
RTN4-207ENST00000402434 STK16O75716 305 aa18.29■□□□□ 0.52
RTN4-207ENST00000402434 WDR47O94967 919 aa18.29■□□□□ 0.52
RTN4-207ENST00000402434 SLU7O95391 586 aaKnown RBP18.29■□□□□ 0.52
RTN4-207ENST00000402434 SNRPAP09012 282 aaKnown RBP18.29■□□□□ 0.52
RTN4-207ENST00000402434 MTHFD2P13995 350 aa18.29■□□□□ 0.52
RTN4-207ENST00000402434 GNAZP19086 355 aa18.29■□□□□ 0.52
RTN4-207ENST00000402434 IL10RAQ13651 578 aa18.29■□□□□ 0.52
RTN4-207ENST00000402434 FAM53BQ14153 422 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms