RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 SGSHP51688 502 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 NR1H2P55055 460 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 SH3BGRP55822 239 aaPredicted RBP6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 ECT2LQ008S8 904 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 SREBF2Q12772 1141 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 GRIK2Q13002 908 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 CAPRIN1Q14444 709 aaKnown RBP6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 TSNQ15631 228 aaKnown RBP6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 NRF1Q16656 503 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 PDCD4Q53EL6 469 aaKnown RBP6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 NHSL2Q5HYW2 709 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 CTSL3PQ5NE16 218 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 INTS11Q5TA45 600 aaKnown RBP6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 AP1ARQ63HQ0 302 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 B3GNT6Q6ZMB0 384 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 EFL1Q7Z2Z2 1120 aaKnown RBP6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 EPHX4Q8IUS5 362 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 DDIASQ8IXT1 998 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 PIANPQ8IYJ0 282 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 TSPAN14Q8NG11 270 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 ZFP28Q8NHY6 868 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 TFAP2CQ92754 450 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 FUBP1Q96AE4 644 aaKnown RBP6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 TUBGCP3Q96CW5 907 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 LRRC58Q96CX6 371 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 NMD3Q96D46 503 aaKnown RBP6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 MPP4Q96JB8 637 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 SLC45A3Q96JT2 553 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 PRPF18Q99633 342 aaKnown RBP6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 CIB1Q99828 191 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 CINPQ9BW66 212 aaPredicted RBP6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 TDRD1Q9BXT4 1180 aaKnown RBP6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 KRTAP9-8Q9BYQ0 159 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 ANKRD60Q9BZ19 345 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 TRIM15Q9C019 465 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 MUC13Q9H3R2 512 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 ELAC1Q9H777 363 aaKnown RBP6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 IL1RL2Q9HB29 575 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 AASDHPPTQ9NRN7 309 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 OLAHQ9NV23 265 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 ACTR3BQ9P1U1 418 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 AGO1Q9UL18 857 aaKnown RBP6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 DMTF1Q9Y222 760 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 SNX13Q9Y5W8 968 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 CEPT1Q9Y6K0 416 aa6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 ZFP37Q9Y6Q3 630 aaPredicted RBP6.6□□□□□ -1.35
CSNK2A1-204ENST00000400227 KIAA1671Q9BY89 1806 aa6.59□□□□□ -1.35
CSNK2A1-204ENST00000400227 TET1Q8NFU7 2136 aa6.59□□□□□ -1.35
CSNK2A1-204ENST00000400227 OBSL1O75147 1896 aa6.59□□□□□ -1.35
CSNK2A1-204ENST00000400227 A0A1W2PP18 115 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 DHRS12A0PJE2 317 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 ARHGAP10A1A4S6 786 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 SAC3D1A6NKF1 404 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 C2orf81A6NN90 581 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 GRXCR1A8MXD5 290 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 H7C4K7 107 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 ANGPT2O15123 496 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 ADAM12O43184 909 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 HNRNPRO43390 633 aaKnown RBP6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 NIPSNAP2O75323 286 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 CLDN11O75508 207 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 EEDO75530 441 aaKnown RBP6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 GJB5O95377 273 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 H6PDO95479 791 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 STAMBPO95630 424 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 ESRRBO95718 433 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 MLYCDO95822 493 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 CD160O95971 181 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 KLKB1P03952 638 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 PYGLP06737 847 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 RHOCP08134 193 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 UROSP10746 265 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 ATP6V1B1P15313 513 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 ZNF23P17027 643 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 CKMT2P17540 419 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 ATF6P18850 670 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 CHRM3P20309 590 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 FPR1P21462 350 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 LPOP22079 712 aaPredicted RBP6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 IL12AP29459 219 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 PRDX3P30048 256 aaKnown RBP6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 ATP5C1P36542 298 aaKnown RBP6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 SLC11A2P49281 568 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 GSK3BP49841 420 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 DIO3P55073 304 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 EEFSECP57772 596 aaKnown RBP6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 CLRN1P58418 232 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 RPS24P62847 133 aaKnown RBP6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 TRAF2Q12933 501 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 RCAN2Q14206 197 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 PUM1Q14671 1186 aaKnown RBP eCLIP6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 GPNMBQ14956 572 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 ATP6AP1Q15904 470 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 UAP1L1Q3KQV9 507 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 C3orf36Q3SXR2 165 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 IL31Q6EBC2 164 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 UGT3A1Q6NUS8 523 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 FUT10Q6P4F1 479 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 DBX2Q6ZNG2 339 aa6.59□□□□□ -1.36
CSNK2A1-204ENST00000400227 ZBTB49Q6ZSB9 765 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms