RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 OR6Y1Q8NGX8 325 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 GCDHQ92947 438 aaPredicted RBP10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 SMURF2Q9HAU4 748 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 STOX2Q9P2F5 926 aaPredicted RBP10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 RAPGEFL1Q9UHV5 662 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 SSR3Q9UNL2 185 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 OR2B3O76000 313 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 GLSO94925 669 aaPredicted RBP10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 SEC24AO95486 1093 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 LCKP06239 509 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 ADAM17P78536 824 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 FAM214AQ32MH5 1076 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 LANCL3Q6ZV70 420 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 PLXDC1Q8IUK5 500 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 C8orf59Q8N0T1 100 aaPredicted RBP10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 DQX1Q8TE96 717 aaKnown RBP10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 ZNF514Q96K75 400 aaPredicted RBP10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 RNF157Q96PX1 679 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 C9orf16Q9BUW7 83 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 FBXO9Q9UK97 447 aaPredicted RBP10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 MYO5BQ9ULV0 1848 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 PRAMEF33A0A0G2JMD5 474 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 PRAMEF10O60809 474 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 STK16O75716 305 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 SLC11A1P49279 550 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 PRAMEF14Q5SWL7 426 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 LRRC38Q5VT99 294 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 PRAMEF13Q5VWM6 474 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 RAB12Q6IQ22 244 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 LBX2Q6XYB7 198 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 ZNF101Q8IZC7 436 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 SLC34A3Q8N130 599 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 GOT1L1Q8NHS2 421 aaPredicted RBP10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 LIPHQ8WWY8 451 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 NAA11Q9BSU3 229 aaPredicted RBP10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 TMED9Q9BVK6 235 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 TRPV4Q9HBA0 871 aa10.68□□□□□ -0.7
CACNA1C-216ENST00000399638 IRGMA1A4Y4 181 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 CPOXP36551 454 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 AIF1P55008 147 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 SLC10A7Q0GE19 358 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 LY6G5CQ5SRR4 150 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 MPP7Q5T2T1 576 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 RNASEH2BQ5TBB1 312 aaKnown RBP10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 NAPRTQ6XQN6 538 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 PIM3Q86V86 326 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 EID2Q8N6I1 236 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 TMEM209Q96SK2 561 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 CCM2Q9BSQ5 444 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 ZNF69Q9UC07 566 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 BTBD17A6NE02 478 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 SOX1O00570 391 aaPredicted RBP10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 FSCN2O14926 492 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 CHADO15335 359 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 NUAK1O60285 661 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 NFATC4Q14934 902 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 TIMM50Q3ZCQ8 353 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 LIN52Q52LA3 116 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 USP51Q70EK9 711 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 ZNF548Q8NEK5 533 aaPredicted RBP10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 PIWIL2Q8TC59 973 aaKnown RBP10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 MAFIPQ8WZ33 124 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 RGMAQ96B86 450 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 PTCHD1Q96NR3 888 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 ZNF317Q96PQ6 595 aaPredicted RBP10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 HES7Q9BYE0 225 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 CDH20Q9HBT6 801 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 ACP6Q9NPH0 428 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 CTPS2Q9NRF8 586 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 PTTG2Q9NZH5 202 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 VWA7Q9Y334 891 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 C2orf72A6NCS6 295 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 AZIN1O14977 448 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 SCO1O75880 301 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 SEMA4FO95754 770 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 CTHP32929 405 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 DSC1Q08554 894 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 FUT2Q10981 343 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 MALLQ13021 153 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 FBXO48Q5FWF7 155 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 ARL9Q6T311 187 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 C4orf32Q8N8J7 132 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 ZDHHC1Q8WTX9 485 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 SLC38A4Q969I6 547 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 PSMG2Q969U7 264 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 NELL2Q99435 816 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 OR51B6Q9H340 312 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 NOL11Q9H8H0 719 aaKnown RBP10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 FKBPLQ9UIM3 349 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 RNF13O43567 381 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 TP53P04637 393 aaPredicted RBP10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 HNRNPLP14866 589 aaKnown RBP eCLIP10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 ENDOUP21128 410 aaKnown RBP10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 CCR10P46092 362 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 BDKRB1P46663 353 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 UBE2UQ5VVX9 321 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 OR10H4Q8NGA5 316 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 OR4C15Q8NGM1 316 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 SNX27Q96L92 541 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 LGR4Q9BXB1 951 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms