RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 PRKCAP17252 672 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 TNFRSF1BP20333 461 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 AZGP1P25311 298 aaKnown RBP13.54□□□□□ -0.24
APOB-202ENST00000399256 CTGFP29279 349 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 PIK3CBP42338 1070 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 KIR3DL1P43629 444 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 CPT1AP50416 773 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 MED22Q15528 200 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 TSTQ16762 297 aaKnown RBP13.54□□□□□ -0.24
APOB-202ENST00000399256 TBRG1Q3YBR2 411 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 ZNF605Q86T29 641 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 CHCHD4Q8N4Q1 142 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 ZFYVE19Q96K21 471 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 COL21A1Q96P44 957 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 OR5M11Q96RB7 305 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 TSEN34Q9BSV6 310 aaKnown RBP13.54□□□□□ -0.24
APOB-202ENST00000399256 GPR63Q9BZJ6 419 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 MAGEH1Q9H213 219 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 TLR8Q9NR97 1041 aaKnown RBP13.54□□□□□ -0.24
APOB-202ENST00000399256 RLIMQ9NVW2 624 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 PAQR5Q9NXK6 330 aaPredicted RBP13.54□□□□□ -0.24
APOB-202ENST00000399256 CAPN5O15484 640 aaPredicted RBP13.53□□□□□ -0.24
APOB-202ENST00000399256 B4GALT3O60512 393 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 STK16O75716 305 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 EPN2O95208 641 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 SNX4O95219 450 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 ALPIP09923 528 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 ARPP19P56211 112 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 NOGQ13253 232 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 GPR50Q13585 617 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 STARD3Q14849 445 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 ZMAT1Q5H9K5 638 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 FAM209AQ5JX71 171 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 FAM124AQ86V42 546 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 CLECL1Q8IZS7 167 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 ELOVL6Q9H5J4 265 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 PLCXD1Q9NUJ7 323 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 FKBP14Q9NWM8 211 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 FLRT1Q9NZU1 646 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 AFF4Q9UHB7 1163 aaKnown RBP13.53□□□□□ -0.24
APOB-202ENST00000399256 SLC6A14Q9UN76 642 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 PCDHB1Q9Y5F3 818 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 GREB1Q4ZG55 1949 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.53□□□□□ -0.24
APOB-202ENST00000399256 E9PQ18 207 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 TNFSF8P32971 234 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 DUOXA1Q1HG43 343 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 IQCCQ4KMZ1 466 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 CCDC58Q4VC31 144 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 C10orf62Q5T681 223 aaPredicted RBP13.53□□□□□ -0.24
APOB-202ENST00000399256 MRPL10Q7Z7H8 261 aaKnown RBP13.53□□□□□ -0.24
APOB-202ENST00000399256 SLC5A8Q8N695 610 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 TRNT1Q96Q11 434 aaKnown RBP13.53□□□□□ -0.24
APOB-202ENST00000399256 ZNF226Q9NYT6 803 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 GOLGA8CPA6NN73 597 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 TBKBP1A7MCY6 615 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 IGLV3-27P01718 113 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 ADRA2AP08913 450 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 PRPS2P11908 318 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 TYMPP19971 482 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 DGKAP23743 735 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 ETV6P41212 452 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 FBXO43Q4G163 708 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 MAL2Q969L2 176 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 TESCQ96BS2 214 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 C7orf34Q96L11 122 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 CAPNS2Q96L46 248 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 EPYCQ99645 322 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 AP5M1Q9H0R1 490 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 PCDHB9Q9Y5E1 797 aa13.53□□□□□ -0.24
APOB-202ENST00000399256 KRT87PA6NCN2 255 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 MAGEB17A8MXT2 336 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 H7C0S8 307 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 PRAMEF1O95521 474 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 F11P03951 625 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 ZNF7P17097 686 aaPredicted RBP13.52□□□□□ -0.24
APOB-202ENST00000399256 EPORP19235 508 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 LIMK1P53667 647 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 KCNJ10P78508 379 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 DMC1Q14565 340 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 TAB1Q15750 504 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 DEFB115Q30KQ5 88 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 ARMC4Q5T2S8 1044 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 ZNF648Q5T619 568 aaPredicted RBP13.52□□□□□ -0.24
APOB-202ENST00000399256 ZNF598Q86UK7 904 aaKnown RBP13.52□□□□□ -0.24
APOB-202ENST00000399256 RAB43Q86YS6 212 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 SPPL2AQ8TCT8 520 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 C8orf48Q96LL4 319 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 PHOX2BQ99453 314 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 CREBZFQ9NS37 354 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 MS4A12Q9NXJ0 267 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 IL17CQ9P0M4 197 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 MUTYHQ9UIF7 546 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 PCDHB8Q9UN66 801 aa13.52□□□□□ -0.24
APOB-202ENST00000399256 PLXNA4Q9HCM2 1894 aa13.52□□□□□ -0.25
APOB-202ENST00000399256 MICAL3Q7RTP6 2002 aa13.52□□□□□ -0.25
APOB-202ENST00000399256 TNFRSF11BO00300 401 aa13.52□□□□□ -0.25
APOB-202ENST00000399256 KDELR3O43731 214 aa13.52□□□□□ -0.25
APOB-202ENST00000399256 RFX2P48378 723 aa13.52□□□□□ -0.25
APOB-202ENST00000399256 CRYBA2P53672 197 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms