RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 RGS4P49798 205 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 MAPK10P53779 464 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 MC2RQ01718 297 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 MC1RQ01726 317 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 EMX2Q04743 252 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 SF3A3Q12874 501 aaKnown RBP eCLIP3.52□□□□□ -1.852e-6■■■■■ 30.6
FNDC3A-202ENST00000398316 CAMK2BQ13554 666 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 LPAL2Q16609 132 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 ZSWIM7Q19AV6 140 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 ZCCHC12Q6PEW1 402 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 Q6ZS52 159 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 RD3Q7Z3Z2 195 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 SUN3Q8TAQ9 357 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 EPS8L3Q8TE67 593 aaKnown RBP3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 NAT6Q93015 286 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 ERLEC1Q96DZ1 483 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 ELF4Q99607 663 aaPredicted RBP3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 SAP130Q9H0E3 1048 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 C1GALT1Q9NS00 363 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 C20orf96Q9NUD7 363 aaPredicted RBP3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 SPASTQ9UBP0 616 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 BTNL2Q9UIR0 455 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 PDZK1P1A8MUH7 402 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 K7EPI3 171 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 UBFD1O14562 309 aaKnown RBP3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 KATNA1O75449 491 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 HSPA4LO95757 839 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 ITGB6P18564 788 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 CXCR2P25025 360 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 SOX9P48436 509 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 SERPINB4P48594 390 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 HNRNPKP61978 463 aaKnown RBP eCLIP3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 E2F1Q01094 437 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 PRDX1Q06830 199 aaKnown RBP3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 ILF3Q12906 894 aaKnown RBP eCLIP3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 IL11RAQ14626 422 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 MUM1Q2TAK8 710 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 FCRL6Q6DN72 434 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 ZNF470Q6ECI4 717 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 GPALPP1Q8IXQ4 340 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 NAGSQ8N159 534 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 FBXO39Q8N4B4 442 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 LINC01555Q8NAE3 123 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 ARL8AQ96BM9 186 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 RMDN1Q96DB5 314 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 WBP1Q96G27 269 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 TOE1Q96GM8 510 aaKnown RBP3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 LRGUKQ96M69 825 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 OR1F2PQ96R84 312 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 FANCFQ9NPI8 374 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 FTSJ1Q9UET6 329 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 MRPS18CQ9Y3D5 142 aaKnown RBP3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 SPAG17Q6Q759 2223 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 A0A087WV62 115 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 A0A096LPK6 155 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 HTR3EA5X5Y0 456 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 RHPN2P1A8MT19 583 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 PI15O43692 258 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 TRIM13O60858 407 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 ATP5HO75947 161 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 VAPBO95292 243 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 SERPINA6P08185 405 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 ACSL1P33121 698 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 ADH7P40394 386 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 CTSCP53634 463 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 PCBP4P57723 403 aaKnown RBP3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 MAXP61244 160 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 RPS15AP62244 130 aaKnown RBP3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 DYNLT1P63172 113 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 MPP1Q00013 466 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 PLCL1Q15111 1095 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 C6orf183Q5T699 404 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 SEL1L3Q68CR1 1132 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 DENND6AQ8IWF6 608 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 SLC25A45Q8N413 288 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 RFWD2Q8NHY2 731 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 TTC8Q8TAM2 541 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 SMPDL3AQ92484 453 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 REPS1Q96D71 796 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 C10orf90Q96M02 699 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 OR2A5Q96R48 311 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 LGR4Q9BXB1 951 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 SPATA16Q9BXB7 569 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 RNF32Q9H0A6 362 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 WDR41Q9HAD4 459 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 FGF22Q9HCT0 170 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.52□□□□□ -1.852e-7■■■■□ 24.5
FNDC3A-202ENST00000398316 COLEC10Q9Y6Z7 277 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 MDC1Q14676 2089 aaKnown RBP3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 TMEM8BA6NDV4 472 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 K7ESM1 405 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 CRCPO75575 148 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 LYPLA1O75608 230 aaPredicted RBP3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 RNASEH2AO75792 299 aaKnown RBP3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 CLPSP04118 112 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 HSMCR30P0CW71 290 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 ATXN8OSP0DMR3 200 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 NR1D1P20393 614 aa3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 ABCE1P61221 599 aaKnown RBP3.52□□□□□ -1.85
FNDC3A-202ENST00000398316 ANGPT1Q15389 498 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms