RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 PRSS58Q8IYP2 241 aa8□□□□□ -1.13
PTPRD-204ENST00000397606 CRIPAKQ8N1N5 446 aa8□□□□□ -1.13
PTPRD-204ENST00000397606 OR6C4Q8NGE1 309 aa8□□□□□ -1.13
PTPRD-204ENST00000397606 ECHDC3Q96DC8 303 aa8□□□□□ -1.13
PTPRD-204ENST00000397606 UHRF1Q96T88 793 aaPredicted RBP8□□□□□ -1.13
PTPRD-204ENST00000397606 FAM129BQ96TA1 746 aa8□□□□□ -1.13
PTPRD-204ENST00000397606 POT1Q9NUX5 634 aa8□□□□□ -1.13
PTPRD-204ENST00000397606 CALML5Q9NZT1 146 aa8□□□□□ -1.13
PTPRD-204ENST00000397606 CA5BQ9Y2D0 317 aa8□□□□□ -1.13
PTPRD-204ENST00000397606 SUV39H1O43463 412 aa8□□□□□ -1.13
PTPRD-204ENST00000397606 MTHFD1P11586 935 aaKnown RBP8□□□□□ -1.13
PTPRD-204ENST00000397606 GABRB3P28472 473 aa8□□□□□ -1.13
PTPRD-204ENST00000397606 GMPRP36959 345 aa8□□□□□ -1.13
PTPRD-204ENST00000397606 SH3BGRP55822 239 aaPredicted RBP8□□□□□ -1.13
PTPRD-204ENST00000397606 BCL7AQ4VC05 210 aa8□□□□□ -1.13
PTPRD-204ENST00000397606 TMEM35AQ53FP2 167 aa8□□□□□ -1.13
PTPRD-204ENST00000397606 C6orf136Q5SQH8 315 aa8□□□□□ -1.13
PTPRD-204ENST00000397606 PPP4R4Q6NUP7 873 aa8□□□□□ -1.13
PTPRD-204ENST00000397606 ZDHHC13Q8IUH4 622 aa8□□□□□ -1.13
PTPRD-204ENST00000397606 SLC22A15Q8IZD6 547 aa8□□□□□ -1.13
PTPRD-204ENST00000397606 JPH3Q8WXH2 748 aaPredicted RBP8□□□□□ -1.13
PTPRD-204ENST00000397606 SLC9A6Q92581 669 aa8□□□□□ -1.13
PTPRD-204ENST00000397606 CNPPD1Q9BV87 410 aa8□□□□□ -1.13
PTPRD-204ENST00000397606 PELI2Q9HAT8 420 aa8□□□□□ -1.13
PTPRD-204ENST00000397606 SAMD4AQ9UPU9 718 aaKnown RBP8□□□□□ -1.13
PTPRD-204ENST00000397606 SNTNA6NMZ2 147 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 YKT6O15498 198 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 SEC24DO94855 1032 aaPredicted RBP7.99□□□□□ -1.13
PTPRD-204ENST00000397606 JMJD7P0C870 316 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 KCNC1P48547 511 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 CSNK1EP49674 416 aaKnown RBP7.99□□□□□ -1.13
PTPRD-204ENST00000397606 NCBP2P52298 156 aaKnown RBP eCLIP7.99□□□□□ -1.13
PTPRD-204ENST00000397606 XIAPP98170 497 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 DEFB133Q30KQ1 61 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 ARHGAP40Q5TG30 622 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 FBXO15Q8NCQ5 510 aaPredicted RBP7.99□□□□□ -1.13
PTPRD-204ENST00000397606 OR52B6Q8NGF0 335 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 FRS2Q8WU20 508 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 NAT6Q93015 286 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 KCNC2Q96PR1 638 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 C17orf62Q9BQA9 187 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 EPHA6Q9UF33 1036 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 PACSIN3Q9UKS6 424 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 MAP4K5Q9Y4K4 846 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 ELOVL7A1L3X0 281 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 LRRC14BA6NHZ5 514 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 GTPBP1O00178 669 aaKnown RBP7.99□□□□□ -1.13
PTPRD-204ENST00000397606 TLR4O00206 839 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 GSC2O15499 205 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 PRMT3O60678 531 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 IL9P15248 144 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 ETV4P43268 484 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 CCR10P46092 362 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 VSX2P58304 361 aaPredicted RBP7.99□□□□□ -1.13
PTPRD-204ENST00000397606 TAS2R50P59544 299 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 SLC34A1Q06495 639 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 CEP76Q8TAP6 659 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 DTNBP1Q96EV8 351 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 UBXN10Q96LJ8 280 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 ZCCHC3Q9NUD5 404 aaKnown RBP7.99□□□□□ -1.13
PTPRD-204ENST00000397606 THUMPD1Q9NXG2 353 aaKnown RBP7.99□□□□□ -1.13
PTPRD-204ENST00000397606 TAAR2Q9P1P5 351 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 DUSP12Q9UNI6 340 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 AP3D1O14617 1153 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 PLRG1O43660 514 aaKnown RBP7.99□□□□□ -1.13
PTPRD-204ENST00000397606 NARSO43776 548 aaKnown RBP7.99□□□□□ -1.13
PTPRD-204ENST00000397606 G6PDP11413 515 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 GCAP28676 217 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 PDHA2P29803 388 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 DLG1Q12959 904 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 CAMK1Q14012 370 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 SMAD2Q15796 467 aaKnown RBP7.99□□□□□ -1.13
PTPRD-204ENST00000397606 FIGLAQ6QHK4 219 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 LCTLQ6UWM7 567 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 USP53Q70EK8 1073 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 NLRP8Q86W28 1048 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 TMEM126BQ8IUX1 230 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 PDPRQ8NCN5 879 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 C7orf57Q8NEG2 295 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 PNPT1Q8TCS8 783 aaKnown RBP7.99□□□□□ -1.13
PTPRD-204ENST00000397606 AGAP11Q8TF27 550 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 C9orf16Q9BUW7 83 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 C1QTNF2Q9BXJ5 285 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 KLHL4Q9C0H6 718 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 FAM120CQ9NX05 1096 aaKnown RBP7.99□□□□□ -1.13
PTPRD-204ENST00000397606 SCN3BQ9NY72 215 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 CPNE7Q9UBL6 633 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 CLCA3PQ9Y6N3 262 aa7.99□□□□□ -1.13
PTPRD-204ENST00000397606 ATXN2Q99700 1313 aaKnown RBP7.99□□□□□ -1.13
PTPRD-204ENST00000397606 DUXAA6NLW8 204 aa7.98□□□□□ -1.13
PTPRD-204ENST00000397606 AREL1O15033 823 aa7.98□□□□□ -1.13
PTPRD-204ENST00000397606 AQP9O43315 295 aa7.98□□□□□ -1.13
PTPRD-204ENST00000397606 DFNA5O60443 496 aa7.98□□□□□ -1.13
PTPRD-204ENST00000397606 ARHGEF15O94989 841 aa7.98□□□□□ -1.13
PTPRD-204ENST00000397606 C1orf105O95561 183 aa7.98□□□□□ -1.13
PTPRD-204ENST00000397606 PDYNP01213 254 aa7.98□□□□□ -1.13
PTPRD-204ENST00000397606 CTSLP07711 333 aa7.98□□□□□ -1.13
PTPRD-204ENST00000397606 DHRS4L1P0CG22 281 aa7.98□□□□□ -1.13
PTPRD-204ENST00000397606 ATP4BP51164 291 aa7.98□□□□□ -1.13
PTPRD-204ENST00000397606 CLCN7P51798 805 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms