RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 PIP5K1BO14986 540 aa12.02□□□□□ -0.48
SMU1-201ENST00000397149 CDC123O75794 336 aaPredicted RBP12.02□□□□□ -0.48
SMU1-201ENST00000397149 RPL10P27635 214 aaKnown RBP12.02□□□□□ -0.48
SMU1-201ENST00000397149 MATKP42679 507 aa12.02□□□□□ -0.48
SMU1-201ENST00000397149 SEC23BQ15437 767 aa12.02□□□□□ -0.48
SMU1-201ENST00000397149 CDNFQ49AH0 187 aa12.02□□□□□ -0.48
SMU1-201ENST00000397149 ANKRD52Q8NB46 1076 aa12.02□□□□□ -0.48
SMU1-201ENST00000397149 FBXO22Q8NEZ5 403 aa12.02□□□□□ -0.48
SMU1-201ENST00000397149 PDLIM2Q96JY6 352 aa12.02□□□□□ -0.48
SMU1-201ENST00000397149 CHRAC1Q9NRG0 131 aa12.02□□□□□ -0.48
SMU1-201ENST00000397149 GPATCH2Q9NW75 528 aa12.02□□□□□ -0.48
SMU1-201ENST00000397149 IFNA1P01562 189 aa12.02□□□□□ -0.48
SMU1-201ENST00000397149 CD3GP09693 182 aa12.02□□□□□ -0.48
SMU1-201ENST00000397149 AUHQ13825 339 aaKnown RBP12.02□□□□□ -0.48
SMU1-201ENST00000397149 COL28A1Q2UY09 1125 aa12.02□□□□□ -0.48
SMU1-201ENST00000397149 OR10G2Q8NGC3 310 aa12.02□□□□□ -0.48
SMU1-201ENST00000397149 OR6N2Q8NGY6 317 aa12.02□□□□□ -0.48
SMU1-201ENST00000397149 DDX1Q92499 740 aaKnown RBP12.02□□□□□ -0.48
SMU1-201ENST00000397149 ZNF670Q9BS34 389 aa12.02□□□□□ -0.48
SMU1-201ENST00000397149 FTHL17Q9BXU8 183 aa12.02□□□□□ -0.48
SMU1-201ENST00000397149 RPL36Q9Y3U8 105 aaKnown RBP12.02□□□□□ -0.48
SMU1-201ENST00000397149 RAB36O95755 333 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 KLK1P06870 262 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 RPL7AP62424 266 aaKnown RBP12.02□□□□□ -0.49
SMU1-201ENST00000397149 RSU1Q15404 277 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 TMX2Q9Y320 296 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 UBE2J1Q9Y385 318 aaPredicted RBP12.02□□□□□ -0.49
SMU1-201ENST00000397149 PCDH7O60245 1069 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 RPL35P42766 123 aaKnown RBP12.02□□□□□ -0.49
SMU1-201ENST00000397149 POU3F4P49335 361 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 CTBP2P56545 445 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 GNA12Q03113 381 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 PRKD1Q15139 912 aaPredicted RBP12.02□□□□□ -0.49
SMU1-201ENST00000397149 ZNF674Q2M3X9 581 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 GARNL3Q5VVW2 1013 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 ZNF100Q8IYN0 542 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 SLC35A5Q9BS91 424 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 ZNF442Q9H7R0 627 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 CXXC1Q9P0U4 656 aaPredicted RBP12.02□□□□□ -0.49
SMU1-201ENST00000397149 POLLQ9UGP5 575 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 ZNF705GA8MUZ8 300 aaPredicted RBP12.02□□□□□ -0.49
SMU1-201ENST00000397149 STK17BO94768 372 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 RPS17P08708 135 aaKnown RBP12.02□□□□□ -0.49
SMU1-201ENST00000397149 ELNP15502 786 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 HABP2Q14520 560 aaPredicted RBP12.02□□□□□ -0.49
SMU1-201ENST00000397149 IGFN1Q86VF2 1251 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 LILRB2Q8N423 598 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 DNAJC5Q9H3Z4 198 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 RCOR3Q9P2K3 495 aaPredicted RBP12.02□□□□□ -0.49
SMU1-201ENST00000397149 SCP2D1Q9UJQ7 156 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 MYO10Q9HD67 2058 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 KIF1BO60333 1816 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 CNTNAP1P78357 1384 aa12.02□□□□□ -0.49
SMU1-201ENST00000397149 TLR4O00206 839 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 TULP2O00295 520 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 ERI3O43414 337 aaKnown RBP12.01□□□□□ -0.49
SMU1-201ENST00000397149 XPNPEP2O43895 674 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 FKTNO75072 461 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 C2P06681 752 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 GGT2P36268 569 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 TMEM110Q86TL2 294 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 PLAGL1Q9UM63 463 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 CDC14AQ9UNH5 594 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 ABCA5Q8WWZ7 1642 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 MICAL3Q7RTP6 2002 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 ZIC2O95409 532 aaPredicted RBP12.01□□□□□ -0.49
SMU1-201ENST00000397149 GOT2P00505 430 aaKnown RBP12.01□□□□□ -0.49
SMU1-201ENST00000397149 TNFP01375 233 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 RPS3P23396 243 aaKnown RBP eCLIP12.01□□□□□ -0.493e-6■■■□□ 16.9
SMU1-201ENST00000397149 VIPR1P32241 457 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 TGFB2P61812 414 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 ZPBP2Q6X784 338 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 AMZ2Q86W34 360 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 DQX1Q8TE96 717 aaKnown RBP12.01□□□□□ -0.49
SMU1-201ENST00000397149 GIMAP5Q96F15 307 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 DENND2DQ9H6A0 471 aaPredicted RBP12.01□□□□□ -0.49
SMU1-201ENST00000397149 TIMMDC1Q9NPL8 285 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 GSTT2P0CG29 244 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 AKR1C4P17516 323 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 AMY2BP19961 511 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 CX3CR1P49238 355 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 ACADVLP49748 655 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 RPS3AP61247 264 aaKnown RBP12.01□□□□□ -0.49
SMU1-201ENST00000397149 ZNF517Q6ZMY9 492 aaPredicted RBP12.01□□□□□ -0.49
SMU1-201ENST00000397149 SLC15A3Q8IY34 581 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 SNIP1Q8TAD8 396 aaKnown RBP12.01□□□□□ -0.49
SMU1-201ENST00000397149 C17orf50Q8WW18 174 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 SNX27Q96L92 541 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 FAM210AQ96ND0 272 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 CLDND1Q9NY35 253 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 SLC2A1P11166 492 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 RAC2P15153 192 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 UGT1A4P22310 534 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 INAVAQ3KP66 663 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 ZNF572Q7Z3I7 529 aaPredicted RBP12.01□□□□□ -0.49
SMU1-201ENST00000397149 OR9K2Q8NGE7 335 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 NEDD4LQ96PU5 975 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 DUSP26Q9BV47 211 aa12.01□□□□□ -0.49
SMU1-201ENST00000397149 MOV10Q9HCE1 1003 aaKnown RBP12.01□□□□□ -0.49
SMU1-201ENST00000397149 CNOT11Q9UKZ1 510 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms