RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 SLC7A5P2Q9GIP4 190 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 P2RY12Q9H244 342 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 VPS11Q9H270 941 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 ZNF552Q9H707 407 aaPredicted RBP9.92□□□□□ -0.82
NEDD8-202ENST00000396828 CAB39LQ9H9S4 337 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 POPDC3Q9HBV1 291 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 KCNK9Q9NPC2 374 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 SLAMF7Q9NQ25 335 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 SLC22A11Q9NSA0 550 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 ASF1BQ9NVP2 202 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 TAS2R13Q9NYV9 303 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 MAP10Q9P2G4 905 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 ERRFI1Q9UJM3 462 aaPredicted RBP9.92□□□□□ -0.82
NEDD8-202ENST00000396828 ASF1AQ9Y294 204 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 TDRKHQ9Y2W6 561 aaKnown RBP9.92□□□□□ -0.82
NEDD8-202ENST00000396828 PTRH2Q9Y3E5 179 aaKnown RBP9.92□□□□□ -0.82
NEDD8-202ENST00000396828 ANKRD12Q6UB98 2062 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 A0A096LPK6 155 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 FOXO6A8MYZ6 492 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 ALOX12BO75342 701 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 AP2A2O94973 939 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 CLDN1O95832 211 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 AGXTP21549 392 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 CD9P21926 228 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 FDXRP22570 491 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 GCGRP47871 477 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 SLC18A2Q05940 514 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 PDAP1Q13442 181 aaKnown RBP9.91□□□□□ -0.82
NEDD8-202ENST00000396828 GRB7Q14451 532 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 NR6A1Q15406 480 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 RHBDD2Q6NTF9 364 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 MRPL14Q6P1L8 145 aaKnown RBP9.91□□□□□ -0.82
NEDD8-202ENST00000396828 PPP1R32Q7Z5V6 425 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 TBC1D1Q86TI0 1168 aaPredicted RBP9.91□□□□□ -0.82
NEDD8-202ENST00000396828 DNAJC22Q8N4W6 341 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 LINC01555Q8NAE3 123 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 LKAAEAR1Q8TD35 194 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 ELMO1Q92556 727 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 KCNJ9Q92806 393 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 APOPT1Q96IL0 206 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 BIRC8Q96P09 236 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 DPH2Q9BQC3 489 aaPredicted RBP9.91□□□□□ -0.82
NEDD8-202ENST00000396828 MESP1Q9BRJ9 268 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 CNOT10Q9H9A5 744 aaKnown RBP9.91□□□□□ -0.82
NEDD8-202ENST00000396828 GPAMQ9HCL2 828 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 NKIRAS1Q9NYS0 192 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 DCDC2Q9UHG0 476 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 TRMT6Q9UJA5 497 aaKnown RBP9.91□□□□□ -0.82
NEDD8-202ENST00000396828 NTNG1Q9Y2I2 539 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 ACOT9Q9Y305 439 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 PCDHGB7Q9Y5F8 929 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 CSAG2Q9Y5P2 127 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 CACNA1DQ01668 2161 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 DOCK10Q96BY6 2186 aa9.91□□□□□ -0.82
NEDD8-202ENST00000396828 CSMD2Q7Z408 3487 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 A0A0J9YY10 115 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 KRT87PA6NCN2 255 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 IQCF5A8MTL0 148 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 C9J4A7 227 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 LIN7AO14910 233 aaPredicted RBP9.9□□□□□ -0.82
NEDD8-202ENST00000396828 KPNA5O15131 536 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 ZSCAN9O15535 394 aaPredicted RBP9.9□□□□□ -0.82
NEDD8-202ENST00000396828 PRPF4O43172 522 aaKnown RBP eCLIP9.9□□□□□ -0.821e-7■□□□□ 8.7
NEDD8-202ENST00000396828 PHGDHO43175 533 aaKnown RBP9.9□□□□□ -0.82
NEDD8-202ENST00000396828 GLRA3O75311 464 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 SPAG7O75391 227 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 ZWINTO95229 277 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 CBX6O95503 412 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 FTH1P02794 183 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 C2P06681 752 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 GSTA1P08263 222 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 COL6A2P12110 1019 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 CCR7P32248 378 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 SHMT2P34897 504 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 CRHR1P34998 444 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 SLC26A3P40879 764 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 CCNFP41002 786 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 MAGEA12P43365 314 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 SLC18A1P54219 525 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 RRADP55042 308 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 CDKN2DP55273 166 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 TAS2R39P59534 338 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 SSPNQ14714 243 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 ZKSCAN8Q15776 578 aaPredicted RBP9.9□□□□□ -0.82
NEDD8-202ENST00000396828 CRB2Q5IJ48 1285 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 CTSL3PQ5NE16 218 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 DCAF10Q5QP82 559 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 ZNF787Q6DD87 383 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 ZNF549Q6P9A3 640 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 CMC1Q7Z7K0 106 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 CEP97Q8IW35 865 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 TBC1D21Q8IYX1 336 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 GPR135Q8IZ08 494 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 GALNT16Q8N428 558 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 BANPQ8N9N5 519 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 OR5K2Q8NHB8 316 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.9□□□□□ -0.82
NEDD8-202ENST00000396828 IL17FQ96PD4 163 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 OLFM1Q99784 485 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 MKS1Q9NXB0 559 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms