RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 KIAA1328Q86T90 577 aa16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 TMEM178AQ8NBL3 297 aa16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 FAM98AQ8NCA5 519 aaKnown RBP16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 FBXO15Q8NCQ5 510 aaPredicted RBP16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 RNF214Q8ND24 703 aa16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 BIRC8Q96P09 236 aa16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 CYTH2Q99418 400 aa16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 UTP23Q9BRU9 249 aaKnown RBP16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 KLHL42Q9P2K6 505 aa16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 DCHS2Q6V1P9 2916 aa16.57■□□□□ 0.24
EXOSC3-202ENST00000396521 MTORP42345 2549 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 KCNE1BA0A087WTH5 132 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 A0A0A6YYC8 382 aaPredicted RBP16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 IGKV1-8A0A0C4DH67 115 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 A8MUI8 341 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 I3L1I5 382 aaPredicted RBP16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 NRP2O60462 931 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 NSA2O95478 260 aaKnown RBP16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 CHRM3P20309 590 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 EEF1DP29692 281 aaKnown RBP16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 PNLIPRP1P54315 467 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 CDK16Q00536 496 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 ALDH6A1Q02252 535 aaKnown RBP16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 C3AR1Q16581 482 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 TYSND1Q2T9J0 566 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 BTBD16Q32M84 506 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 TTLL9Q3SXZ7 439 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 MEI1Q5TIA1 1274 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 SPNS3Q6ZMD2 512 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 ZNF295-AS1Q8N0V1 137 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 LGI4Q8N135 537 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 OTUD6BQ8N6M0 293 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 ADAMTS18Q8TE60 1221 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 PHF10Q8WUB8 498 aaKnown RBP16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 THAP11Q96EK4 314 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 HES6Q96HZ4 224 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 VN1R1Q9GZP7 353 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 TAC3Q9UHF0 121 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 SH3BGRL2Q9UJC5 107 aa16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 RUVBL2Q9Y230 463 aaKnown RBP16.56■□□□□ 0.24
EXOSC3-202ENST00000396521 PCNX1Q96RV3 2341 aa16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 TCRBV7S2A1N4TA0A589 114 aa16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 ASPDHA6ND91 283 aa16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 ARHGEF33A8MVX0 844 aa16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 KIF5CO60282 957 aa16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 CELA2AP08217 269 aa16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 SNRPB2P08579 225 aaKnown RBP16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 IL10P22301 178 aa16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 YBX1P67809 324 aaKnown RBP16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 ADORA2A-AS1P86434 159 aa16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 CTSL3PQ5NE16 218 aa16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 SEL1L2Q5TEA6 688 aa16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 SUSD1Q6UWL2 747 aa16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 SLC5A8Q8N695 610 aa16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 M1APQ8TC57 530 aa16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 CHTF18Q8WVB6 975 aa16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 ATG4AQ8WYN0 398 aa16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 LPGAT1Q92604 370 aa16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 KIFC1Q9BW19 673 aa16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 TSGA10Q9BZW7 698 aa16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 PCYOX1Q9UHG3 505 aa16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 MEMO1Q9Y316 297 aa16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 REXO2Q9Y3B8 237 aaKnown RBP16.55■□□□□ 0.24
EXOSC3-202ENST00000396521 E5RI56 91 aa16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 E7ENX8 843 aa16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 VAPBO95292 243 aa16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 SLC16A8O95907 504 aa16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 FMO4P31512 558 aa16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 SESN2P58004 480 aaPredicted RBP16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 RPS15AP62244 130 aaKnown RBP16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 TAP2Q03519 686 aa16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 TSTA3Q13630 321 aaPredicted RBP16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 TUBA3CQ13748 450 aa16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 KLHL38Q2WGJ6 581 aa16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 MINDY4Q4G0A6 757 aa16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 TUBA3EQ6PEY2 450 aa16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 ADCK2Q7Z695 626 aa16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 MDS2Q8NDY4 140 aa16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 SCMH1Q96GD3 660 aa16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 PCBD2Q9H0N5 130 aa16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 KCNK13Q9HB14 408 aa16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 MMP25Q9NPA2 562 aa16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 TMEM184CQ9NVA4 438 aa16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 TINAGQ9UJW2 476 aa16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 PACSIN2Q9UNF0 486 aaPredicted RBP16.54■□□□□ 0.24
EXOSC3-202ENST00000396521 KRT87PA6NCN2 255 aa16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 E9PLN8 166 aa16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 SMAPO00193 183 aa16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 FFAR3O14843 346 aa16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 FANCGO15287 622 aa16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 GPR42O15529 346 aa16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 ZBTB14O43829 449 aa16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 SEC24DO94855 1032 aaPredicted RBP16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 FTCDO95954 541 aa16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 PAMP19021 973 aa16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 OGNP20774 298 aaKnown RBP16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 TAS2R50P59544 299 aa16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 OR1C1Q15619 314 aa16.53■□□□□ 0.24
EXOSC3-202ENST00000396521 KRTAP21-3Q3LHN1 58 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms