RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 COQ8BQ96D53 544 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 CXorf40BQ96DE9 158 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 ASB16Q96NS5 453 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 MBOAT4Q96T53 435 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 EFCAB11Q9BUY7 163 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 DUSP26Q9BV47 211 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 DPEP2Q9H4A9 486 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 ITM2CQ9NQX7 267 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 DDX18Q9NVP1 670 aaKnown RBP16.2■□□□□ 0.18
NUP50-202ENST00000396096 FAM118AQ9NWS6 357 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 ERVK-11Q9UQG0 969 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 PCDHB11Q9Y5F2 797 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 COL4A3Q01955 1670 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 YY2O15391 372 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 VEGFDO43915 354 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 TRMUO75648 421 aaKnown RBP16.2■□□□□ 0.18
NUP50-202ENST00000396096 SEMG1P04279 462 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 ANXA4P09525 319 aaPredicted RBP16.2■□□□□ 0.18
NUP50-202ENST00000396096 NPPBP16860 134 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 TIA1P31483 386 aaKnown RBP eCLIP16.2■□□□□ 0.18
NUP50-202ENST00000396096 SHMT2P34897 504 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 VAC14Q08AM6 782 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 LAPTM5Q13571 262 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 GTF2H3Q13889 308 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 PLCL1Q15111 1095 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 ZC3H12BQ5HYM0 836 aaKnown RBP16.2■□□□□ 0.18
NUP50-202ENST00000396096 ANXA8L1Q5VT79 327 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 RAET1GQ6H3X3 334 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 ADNP2Q6IQ32 1131 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 THAP5Q7Z6K1 395 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 TRIM74Q86UV6 250 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 PTOV1Q86YD1 416 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 HIPK1Q86Z02 1210 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 TRAPPC5Q8IUR0 188 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 ERI1Q8IV48 349 aaKnown RBP16.2■□□□□ 0.18
NUP50-202ENST00000396096 NPAS3Q8IXF0 933 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 SMARCD2Q92925 531 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 TMEM106CQ9BVX2 250 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 GABARAPL1Q9H0R8 117 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 SMURF2Q9HAU4 748 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 IFT80Q9P2H3 777 aaPredicted RBP16.2■□□□□ 0.18
NUP50-202ENST00000396096 ATXN10Q9UBB4 475 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 CIDEBQ9UHD4 219 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 BTBD3Q9Y2F9 522 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 AP1M2Q9Y6Q5 423 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 C2orf16Q68DN1 1984 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 OTOL1A6NHN0 477 aaPredicted RBP16.19■□□□□ 0.18
NUP50-202ENST00000396096 GABRR3A8MPY1 467 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 MMP20O60882 483 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 IDSP22304 550 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 PPIBP23284 216 aaKnown RBP16.19■□□□□ 0.18
NUP50-202ENST00000396096 ACADLP28330 430 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 HPCAL1P37235 193 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 VEZF1Q14119 521 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 ZNF234Q14588 700 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 RFX4Q33E94 735 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 CPTPQ5TA50 214 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 ZCCHC8Q6NZY4 707 aaKnown RBP16.19■□□□□ 0.18
NUP50-202ENST00000396096 SPESP1Q6UW49 350 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 ZNF621Q6ZSS3 439 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 ERN2Q76MJ5 926 aaKnown RBP16.19■□□□□ 0.18
NUP50-202ENST00000396096 TMEM179BQ7Z7N9 219 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 TMPRSS11BQ86T26 416 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 ZNF547Q8IVP9 402 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 SYTL1Q8IYJ3 562 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 CLECL1Q8IZS7 167 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 OR2L2Q8NH16 312 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 OBP2AQ9NY56 170 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 ATP6V1HQ9UI12 483 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 RPS6KA6Q9UK32 745 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 CORO2BQ9UQ03 480 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 TSC22D4Q9Y3Q8 395 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 DYRK1BQ9Y463 629 aa16.19■□□□□ 0.18
NUP50-202ENST00000396096 C1orf226A1L170 272 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 HEPACAM2A8MVW5 462 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 LZTS3O60299 673 aaPredicted RBP16.18■□□□□ 0.18
NUP50-202ENST00000396096 ABCB1P08183 1280 aaPredicted RBP16.18■□□□□ 0.18
NUP50-202ENST00000396096 C1GALT1C1LP0DN25 315 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 PCSK6P29122 969 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 RPS13P62277 151 aaKnown RBP16.18■□□□□ 0.18
NUP50-202ENST00000396096 PAGE2BQ5JRK9 111 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 RBM48Q5RL73 367 aaKnown RBP16.18■□□□□ 0.18
NUP50-202ENST00000396096 SHQ1Q6PI26 577 aaKnown RBP16.18■□□□□ 0.18
NUP50-202ENST00000396096 UNC5DQ6UXZ4 953 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 ZDHHC21Q8IVQ6 265 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 C8orf59Q8N0T1 100 aaPredicted RBP16.18■□□□□ 0.18
NUP50-202ENST00000396096 SYNPOQ8N3V7 929 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 C12orf76Q8N812 135 aaPredicted RBP16.18■□□□□ 0.18
NUP50-202ENST00000396096 ZNF555Q8NEP9 628 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 VPS37AQ8NEZ2 397 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.18■□□□□ 0.18
NUP50-202ENST00000396096 ZFYVE19Q96K21 471 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 HDAC8Q9BY41 377 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 AMBRA1Q9C0C7 1298 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 CHST8Q9H2A9 424 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 IL1RAPQ9NPH3 570 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 ATG2AQ2TAZ0 1938 aa16.18■□□□□ 0.18
NUP50-202ENST00000396096 POP7O75817 140 aaKnown RBP16.18■□□□□ 0.18
NUP50-202ENST00000396096 CPSF4O95639 269 aaKnown RBP16.18■□□□□ 0.18
NUP50-202ENST00000396096 C1QCP02747 245 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms