RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 VPS29Q9UBQ0 182 aa23.62■■□□□ 1.37
CTF1-202ENST00000395019 PRAMEF33A0A0G2JMD5 474 aa23.62■■□□□ 1.37
CTF1-202ENST00000395019 A0A1W2PP18 115 aa23.62■■□□□ 1.37
CTF1-202ENST00000395019 DYTNA2CJ06 578 aa23.62■■□□□ 1.37
CTF1-202ENST00000395019 PATE3B3GLJ2 98 aa23.62■■□□□ 1.37
CTF1-202ENST00000395019 C9JVG2 144 aa23.62■■□□□ 1.37
CTF1-202ENST00000395019 PRPS2P11908 318 aa23.62■■□□□ 1.37
CTF1-202ENST00000395019 AMD1P17707 334 aa23.62■■□□□ 1.37
CTF1-202ENST00000395019 MAPK1P28482 360 aa23.62■■□□□ 1.37
CTF1-202ENST00000395019 DDX39BQ13838 428 aaKnown RBP23.62■■□□□ 1.37
CTF1-202ENST00000395019 TCEA2Q15560 299 aa23.62■■□□□ 1.37
CTF1-202ENST00000395019 VPS26BQ4G0F5 336 aa23.62■■□□□ 1.37
CTF1-202ENST00000395019 PEAR1Q5VY43 1037 aaPredicted RBP23.62■■□□□ 1.37
CTF1-202ENST00000395019 LIX1Q8N485 282 aa23.62■■□□□ 1.37
CTF1-202ENST00000395019 PCYOX1LQ8NBM8 494 aa23.62■■□□□ 1.37
CTF1-202ENST00000395019 SLC45A3Q96JT2 553 aa23.62■■□□□ 1.37
CTF1-202ENST00000395019 GSDMCQ9BYG8 508 aa23.62■■□□□ 1.37
CTF1-202ENST00000395019 DENND2DQ9H6A0 471 aaPredicted RBP23.62■■□□□ 1.37
CTF1-202ENST00000395019 PCDH15Q96QU1 1955 aa23.61■■□□□ 1.37
CTF1-202ENST00000395019 MAGEB17A8MXT2 336 aa23.61■■□□□ 1.37
CTF1-202ENST00000395019 FOXE1O00358 373 aaPredicted RBP23.61■■□□□ 1.37
CTF1-202ENST00000395019 ANGPT2O15123 496 aa23.61■■□□□ 1.37
CTF1-202ENST00000395019 BCKDHAP12694 445 aa23.61■■□□□ 1.37
CTF1-202ENST00000395019 BNC1Q01954 994 aa23.61■■□□□ 1.37
CTF1-202ENST00000395019 ADNP2Q6IQ32 1131 aa23.61■■□□□ 1.37
CTF1-202ENST00000395019 RETREG3Q86VR2 466 aa23.61■■□□□ 1.37
CTF1-202ENST00000395019 PARGQ86W56 976 aa23.61■■□□□ 1.37
CTF1-202ENST00000395019 SYT12Q8IV01 421 aa23.61■■□□□ 1.37
CTF1-202ENST00000395019 PHACTR4Q8IZ21 702 aa23.61■■□□□ 1.37
CTF1-202ENST00000395019 FAM9CQ8IZT9 166 aa23.61■■□□□ 1.37
CTF1-202ENST00000395019 KRT78Q8N1N4 520 aa23.61■■□□□ 1.37
CTF1-202ENST00000395019 SUMF1Q8NBK3 374 aa23.61■■□□□ 1.37
CTF1-202ENST00000395019 ATOH1Q92858 354 aaPredicted RBP23.61■■□□□ 1.37
CTF1-202ENST00000395019 ROPN1LQ96C74 230 aa23.61■■□□□ 1.37
CTF1-202ENST00000395019 SPNS1Q9H2V7 528 aa23.61■■□□□ 1.37
CTF1-202ENST00000395019 TCEAL2Q9H3H9 227 aaPredicted RBP23.61■■□□□ 1.37
CTF1-202ENST00000395019 SMOC1Q9H4F8 434 aa23.61■■□□□ 1.37
CTF1-202ENST00000395019 SLC7A8Q9UHI5 535 aa23.61■■□□□ 1.37
CTF1-202ENST00000395019 KLF15Q9UIH9 416 aa23.61■■□□□ 1.37
CTF1-202ENST00000395019 PCDHB11Q9Y5F2 797 aa23.61■■□□□ 1.37
CTF1-202ENST00000395019 SLC19A1P41440 591 aa23.6■■□□□ 1.37
CTF1-202ENST00000395019 BLKP51451 505 aa23.6■■□□□ 1.37
CTF1-202ENST00000395019 IQCHQ86VS3 1027 aa23.6■■□□□ 1.37
CTF1-202ENST00000395019 CXorf40BQ96DE9 158 aa23.6■■□□□ 1.37
CTF1-202ENST00000395019 DLGAP4Q9Y2H0 992 aa23.6■■□□□ 1.37
CTF1-202ENST00000395019 A0A1B0GVT2 93 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 CCDC154A6NI56 674 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 TLR4O00206 839 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 PRICKLE3O43900 615 aaPredicted RBP23.59■■□□□ 1.37
CTF1-202ENST00000395019 CXCR2P25025 360 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 PSMB5P28074 263 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 CCR8P51685 355 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 AFF3P51826 1226 aaKnown RBP23.59■■□□□ 1.37
CTF1-202ENST00000395019 YBX1P67809 324 aaKnown RBP23.59■■□□□ 1.37
CTF1-202ENST00000395019 PTGR1Q14914 329 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 ICE2Q659A1 982 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 C8orf82Q6P1X6 216 aaPredicted RBP23.59■■□□□ 1.37
CTF1-202ENST00000395019 BNC2Q6ZN30 1099 aaPredicted RBP23.59■■□□□ 1.37
CTF1-202ENST00000395019 GLB1L3Q8NCI6 653 aaPredicted RBP23.59■■□□□ 1.37
CTF1-202ENST00000395019 OR4K1Q8NGD4 311 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 APOLD1Q96LR9 279 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 AIF1LQ9BQI0 150 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 PITHD1Q9GZP4 211 aaPredicted RBP23.59■■□□□ 1.37
CTF1-202ENST00000395019 ARRDC1-AS1Q9H2J1 176 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 MAP10Q9P2G4 905 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 A0A1B0GTW7 788 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 EEDO75530 441 aaKnown RBP23.59■■□□□ 1.37
CTF1-202ENST00000395019 CIB2O75838 187 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 EPN2O95208 641 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 SHMT2P34897 504 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 PIK3CBP42338 1070 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 MTTPP55157 894 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 PSME3P61289 254 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 RPS13P62277 151 aaKnown RBP23.59■■□□□ 1.37
CTF1-202ENST00000395019 MEF2AQ02078 507 aaPredicted RBP23.59■■□□□ 1.37
CTF1-202ENST00000395019 PRDX1Q06830 199 aaKnown RBP23.59■■□□□ 1.37
CTF1-202ENST00000395019 ZNF542PQ5EBM4 170 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 NOXRED1Q6NXP6 359 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 IYDQ6PHW0 289 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 TMIGD1Q6UXZ0 262 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 NET1Q7Z628 596 aaPredicted RBP23.59■■□□□ 1.37
CTF1-202ENST00000395019 FBXW8Q8N3Y1 598 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 OR2A1Q8NGT9 310 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 CDRT15Q96T59 188 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 SERPINI1Q99574 410 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 ZBTB18Q99592 522 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 DPY30Q9C005 99 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 NT5DC2Q9H857 520 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 DMRT3Q9NQL9 472 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 CUEDC1Q9NWM3 386 aaPredicted RBP23.59■■□□□ 1.37
CTF1-202ENST00000395019 NMRK1Q9NWW6 199 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 TAAR2Q9P1P5 351 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 CROTQ9UKG9 612 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 PPT2Q9UMR5 302 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 RUVBL1Q9Y265 456 aaKnown RBP23.59■■□□□ 1.37
CTF1-202ENST00000395019 PCDHGA7Q9Y5G6 932 aa23.59■■□□□ 1.37
CTF1-202ENST00000395019 VILLO15195 856 aa23.58■■□□□ 1.36
CTF1-202ENST00000395019 CFLARO15519 480 aa23.58■■□□□ 1.36
CTF1-202ENST00000395019 ETHE1O95571 254 aa23.58■■□□□ 1.36
CTF1-202ENST00000395019 DPP6P42658 865 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms