RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 BABAM2Q9NXR7 383 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 MIOXQ9UGB7 285 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 ZFR2Q9UPR6 939 aaKnown RBP12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 NHSQ6T4R5 1651 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 M0R233 179 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 ARVCFO00192 962 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 HRO43593 1189 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 TRIM3O75382 744 aaPredicted RBP12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 TSPAN12O95859 305 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 EGFP01133 1207 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 GGT1P19440 569 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 LHCGRP22888 699 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 AGFG1P52594 562 aaKnown RBP12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 ZNF143P52747 638 aaPredicted RBP12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 CXCR4P61073 352 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 YWHAEP62258 255 aaKnown RBP12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 RPP38P78345 283 aaKnown RBP12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 EMX2Q04743 252 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 FOXM1Q08050 763 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 IFRD2Q12894 506 aaPredicted RBP12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 TBCEQ15813 527 aaPredicted RBP12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 ERFEQ4G0M1 354 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 C9orf152Q5JTZ5 239 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 CELF3Q5SZQ8 465 aaKnown RBP12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 NSMAFQ92636 917 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 P2RY11Q96G91 374 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 RHOJQ9H4E5 214 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 NMUR1Q9HB89 426 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 C3orf14Q9HBI5 128 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 RBFOX1Q9NWB1 397 aaKnown RBP12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 KIF17Q9P2E2 1029 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 CHD5Q8TDI0 1954 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 A0A075B6Q4 140 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 A0A087WZ62 844 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 EFCAB7A8K855 629 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 LYRM1O43325 122 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 SNAPINO95295 136 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 CYP17A1P05093 508 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 SLC2A2P11168 524 aaPredicted RBP12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 HOXA9P31269 272 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 GMPSP49915 693 aaPredicted RBP12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 HK3P52790 923 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 P2RY14Q15391 338 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 TEAD4Q15561 434 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 RYBPQ8N488 228 aaPredicted RBP12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 IPCEF1Q8WWN9 437 aaPredicted RBP12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 FCGR1BQ92637 280 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 THUMPD3Q9BV44 507 aaKnown RBP12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 PAPOLGQ9BWT3 736 aaKnown RBP12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 HAPLN2Q9GZV7 340 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 ALG9Q9H6U8 611 aa12.16□□□□□ -0.46
SLC28A1-203ENST00000394573 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 SEC22BO75396 215 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 VPS26AO75436 327 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 HTR3BO95264 441 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 SIX6O95475 246 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 NTSR2O95665 410 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 ADRA2AP08913 450 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 LBPP18428 481 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 CLDN20P56880 219 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 HSF2Q03933 536 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 MPEG1Q2M385 716 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 OVCH2Q7RTZ1 564 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 TMEM135Q86UB9 458 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 RNF130Q86XS8 419 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 SPATA2LQ8IUW3 424 aaPredicted RBP12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 ZNF567Q8N184 647 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 OR2T12Q8NG77 320 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 TMEM174Q8WUU8 243 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 LRRC46Q96FV0 321 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 KCNC2Q96PR1 638 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 TCF25Q9BQ70 676 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 TMEM175Q9BSA9 504 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 ERVK-6Q9BXR3 956 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 WDR11Q9BZH6 1224 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 PIGUQ9H490 435 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 CDHR5Q9HBB8 845 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 GLS2Q9UI32 602 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 GPR160Q9UJ42 338 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 NDRG4Q9ULP0 352 aaKnown RBP12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 NCKAP1Q9Y2A7 1128 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 COL1A2P08123 1366 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 RBBP6Q7Z6E9 1792 aaKnown RBP12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 M0QYV0 167 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 GATCO43716 136 aaKnown RBP12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 OAZ2O95190 189 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 IDH2P48735 452 aaKnown RBP12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 NUBP1P53384 320 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 CAV3P56539 151 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 ST3GAL4Q11206 333 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 DMC1Q14565 340 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 MICAQ29983 383 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 KLHL22Q53GT1 634 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 FAM74A1Q5RGS3 127 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 HES5Q5TA89 166 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 ZNF57Q68EA5 555 aaPredicted RBP12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 ALKAL2Q6UX46 152 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 USP45Q70EL2 814 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 PHYKPLQ8IUZ5 450 aa12.15□□□□□ -0.46
SLC28A1-203ENST00000394573 Q8N402 240 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms