RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 SNAPC3Q92966 411 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 ZNF75AQ96N20 296 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 TPT1P8Q9HAU6 139 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 FBXO5Q9UKT4 447 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.09□□□□□ -0.31
USP49-203ENST00000394253 BNIP3Q12983 259 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 SLC26A9Q7LBE3 791 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 SIRT2Q8IXJ6 389 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 ZNF611Q8N823 705 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 SLC35G5Q96KT7 338 aa13.09□□□□□ -0.31
USP49-203ENST00000394253 RAC2P15153 192 aa13.08□□□□□ -0.31
USP49-203ENST00000394253 TMEM126BQ8IUX1 230 aa13.08□□□□□ -0.31
USP49-203ENST00000394253 SUMF2Q8NBJ7 301 aa13.08□□□□□ -0.31
USP49-203ENST00000394253 OR8D1Q8WZ84 308 aa13.08□□□□□ -0.31
USP49-203ENST00000394253 ZNF416Q9BWM5 594 aa13.08□□□□□ -0.31
USP49-203ENST00000394253 SEMA6BQ9H3T3 888 aa13.08□□□□□ -0.31
USP49-203ENST00000394253 EFCAB6Q5THR3 1501 aa13.08□□□□□ -0.31
USP49-203ENST00000394253 OR6C65A6NJZ3 312 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 OR7A17O14581 309 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 STK17BO94768 372 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 CXCR1P25024 350 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 MRPS10P82664 201 aaKnown RBP13.08□□□□□ -0.32
USP49-203ENST00000394253 OR2T5Q6IEZ7 315 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 UGT2A3Q6UWM9 527 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 TMCO2Q7Z6W1 182 aaPredicted RBP13.08□□□□□ -0.32
USP49-203ENST00000394253 PYROXD2Q8N2H3 581 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 OR2T29Q8NH02 315 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 ISOC1Q96CN7 298 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 SAMD11Q96NU1 681 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 COL21A1Q96P44 957 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 IPPKQ9H8X2 491 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 PLCXD1Q9NUJ7 323 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 SRRDQ9UH36 339 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 K7EPK0 472 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 SMAD9O15198 467 aaKnown RBP13.08□□□□□ -0.32
USP49-203ENST00000394253 BEST1O76090 585 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 DGKGP49619 791 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 CTBP1Q13363 440 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 WDR45BQ5MNZ6 344 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 IDO2Q6ZQW0 420 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 FAM71E2Q8N5Q1 922 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 NEIL3Q8TAT5 605 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 SLC44A1Q8WWI5 657 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 KCNC2Q96PR1 638 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 SDHAF2Q9NX18 166 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 KIF26BQ2KJY2 2108 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 AGPSO00116 658 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 ABCB7O75027 752 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 ACTA2P62736 377 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 ACTG2P63267 376 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 TCEAL2Q9H3H9 227 aaPredicted RBP13.08□□□□□ -0.32
USP49-203ENST00000394253 ZBTB26Q9HCK0 441 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 PNPOQ9NVS9 261 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 STUB1Q9UNE7 303 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 S1PR1P21453 382 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 FSTL1Q12841 308 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 LRP8Q14114 963 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 ABHD13Q7L211 337 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 ANKRD46Q86W74 232 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 IFNL1Q8IU54 200 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 LIX1Q8N485 282 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 FAM46DQ8NEK8 389 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 RNF128Q8TEB7 428 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 GLYATL1Q969I3 302 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 TTYH2Q9BSA4 534 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 OR2S2Q9NQN1 319 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 ASF1BQ9NVP2 202 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 ALAS2P22557 587 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 SLC6A6P31641 620 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 FCGRTP55899 365 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 TSTQ16762 297 aaKnown RBP13.08□□□□□ -0.32
USP49-203ENST00000394253 NT5DC1Q5TFE4 455 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 CES5AQ6NT32 575 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 MYLIPQ8WY64 445 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 NSUN4Q96CB9 384 aaKnown RBP13.08□□□□□ -0.32
USP49-203ENST00000394253 KCNIP2Q9NS61 270 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 USP42Q9H9J4 1324 aaKnown RBP13.08□□□□□ -0.32
USP49-203ENST00000394253 PEA15Q15121 130 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 DHCR24Q15392 516 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 SPIN4Q56A73 249 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 NDUFAF5Q5TEU4 345 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 ELP2Q6IA86 826 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 GPR151Q8TDV0 419 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 ASAH2Q9NR71 780 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 ALKBH4Q9NXW9 302 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 POMPQ9Y244 141 aa13.08□□□□□ -0.32
USP49-203ENST00000394253 EME2A4GXA9 379 aaPredicted RBP13.07□□□□□ -0.32
USP49-203ENST00000394253 SLC37A4O43826 429 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 C8GP07360 202 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 SNTA1Q13424 505 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 PCK2Q16822 640 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 AQP12AQ8IXF9 295 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 PLEKHO2Q8TD55 490 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 COQ10AQ96MF6 247 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 REEP4Q9H6H4 257 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 KLHL13Q9P2N7 655 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 OAZ3Q9UMX2 235 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 C2orf72A6NCS6 295 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 TOXO94900 526 aa13.07□□□□□ -0.32
USP49-203ENST00000394253 APOA2P02652 100 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms