RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 TUBA3EQ6PEY2 450 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 MOB2Q70IA6 237 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 SLAIN1Q8ND83 568 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 CPT1BQ92523 772 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 C7orf26Q96N11 449 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 ZNF717Q9BY31 904 aaPredicted RBP5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 LHX5Q9H2C1 402 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 IKZF4Q9H2S9 585 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 OR51I1Q9H343 314 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 DENND2DQ9H6A0 471 aaPredicted RBP5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 SLC28A3Q9HAS3 691 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 ZNF701Q9NV72 531 aaPredicted RBP5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 SLC39A1Q9NY26 324 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 TAS2R3Q9NYW6 316 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 REV1Q9UBZ9 1251 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 NUFIP1Q9UHK0 495 aaKnown RBP5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 RPL26L1Q9UNX3 145 aaKnown RBP5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 A0A0A6YYH2 397 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 SLC15A5A6NIM6 579 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 A6NJ64 397 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 TRIM64CA6NLI5 447 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 TULP2O00295 520 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 SLC22A1O15245 554 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 XPNPEP2O43895 674 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 CTHP32929 405 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 DGKGP49619 791 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 PCBP1Q15365 356 aaKnown RBP eCLIP5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 GDF6Q6KF10 455 aaPredicted RBP5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 ADGRD1Q6QNK2 874 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 MBOAT1Q6ZNC8 495 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 PLD5Q8N7P1 536 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 SHKBP1Q8TBC3 707 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 HAS1Q92839 578 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 C7orf34Q96L11 122 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 DCSTAMPQ9H295 470 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 TMEM185BQ9H7F4 350 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 CARS2Q9HA77 564 aaKnown RBP5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 CACNG4Q9UBN1 327 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 PCDHGC3Q9UN70 934 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 CEMIPQ8WUJ3 1361 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 FAM170BA6NMN3 283 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 SPATA31C2B4DYI2 1134 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 BRINP1O60477 761 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 H6PDO95479 791 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 ADRA1BP35368 520 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 CCNFP41002 786 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 DSC3Q14574 896 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.53□□□□□ -1.524e-6■■■□□ 15.4
GAPVD1-206ENST00000394104 INTS6LQ5JSJ4 861 aaKnown RBP5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 TMEM110Q86TL2 294 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 GALNT12Q8IXK2 581 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 TMEM156Q8N614 296 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 OR13C3Q8NGS6 347 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 PPTC7Q8NI37 304 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 TRMT10AQ8TBZ6 339 aaKnown RBP5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 POC1BQ8TC44 478 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 FANK1Q8TC84 345 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 PYCR2Q96C36 320 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 TRIM36Q9NQ86 728 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 RHCGQ9UBD6 479 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 OR51F1A6NGY5 319 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 IRF6O14896 467 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 CPNE6O95741 557 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 GP1BBP13224 206 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 PTPN2P17706 415 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 LEPRP48357 1165 aaKnown RBP5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 LUMP51884 338 aaPredicted RBP5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 CDH15P55291 814 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 KRBOX4Q5JUW0 171 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 PRSS55Q6UWB4 352 aaPredicted RBP5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 CERS6Q6ZMG9 384 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 IRF2BP2Q7Z5L9 587 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 SLC15A3Q8IY34 581 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 FITM2Q8N6M3 262 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 IL31RAQ8NI17 732 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 SNIP1Q8TAD8 396 aaKnown RBP5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 PLD4Q96BZ4 506 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 CPNE2Q96FN4 548 aaPredicted RBP5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 TMEM80Q96HE8 168 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 OR5B12Q96R08 314 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 FBRSQ9HAH7 460 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 PPM1HQ9ULR3 514 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 PCDHGA8Q9Y5G5 932 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 C11orf98E9PRG8 122 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 AGPSO00116 658 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 SHOXO15266 292 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 DIRAS1O95057 198 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 LATS1O95835 1130 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 H1F0P07305 194 aaKnown RBP5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 SPARCP09486 303 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 ALPIP09923 528 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 GTF2F2P13984 249 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 EPCAMP16422 314 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 RPL17P18621 184 aaKnown RBP5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 RPS3P23396 243 aaKnown RBP eCLIP5.53□□□□□ -1.525e-28■■■□□ 15.7
GAPVD1-206ENST00000394104 EDNRBP24530 442 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 CCND3P30281 292 aaPredicted RBP5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 FASLGP48023 281 aa5.53□□□□□ -1.52
GAPVD1-206ENST00000394104 PER3P56645 1201 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms