RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 TCAF2A6NFQ2 919 aa11.08□□□□□ -0.64
LAMB1-203ENST00000393560 G3V2T6 193 aa11.08□□□□□ -0.64
LAMB1-203ENST00000393560 ERN1O75460 977 aaKnown RBP11.08□□□□□ -0.64
LAMB1-203ENST00000393560 SPI1P17947 270 aa11.08□□□□□ -0.64
LAMB1-203ENST00000393560 PVALBP20472 110 aaPredicted RBP11.08□□□□□ -0.64
LAMB1-203ENST00000393560 ZNF81P51508 661 aa11.08□□□□□ -0.64
LAMB1-203ENST00000393560 AP1S1P61966 158 aa11.08□□□□□ -0.64
LAMB1-203ENST00000393560 GRIN2CQ14957 1233 aa11.08□□□□□ -0.64
LAMB1-203ENST00000393560 C6orf141Q5SZD1 244 aa11.08□□□□□ -0.64
LAMB1-203ENST00000393560 CMTR2Q8IYT2 770 aaKnown RBP11.08□□□□□ -0.64
LAMB1-203ENST00000393560 RDH10Q8IZV5 341 aa11.08□□□□□ -0.64
LAMB1-203ENST00000393560 C12orf29Q8N999 325 aa11.08□□□□□ -0.64
LAMB1-203ENST00000393560 GATAD2BQ8WXI9 593 aa11.08□□□□□ -0.64
LAMB1-203ENST00000393560 ASB15Q8WXK1 588 aa11.08□□□□□ -0.64
LAMB1-203ENST00000393560 MS4A3Q96HJ5 214 aa11.08□□□□□ -0.64
LAMB1-203ENST00000393560 SFXN2Q96NB2 322 aa11.08□□□□□ -0.64
LAMB1-203ENST00000393560 GFM1Q96RP9 751 aaKnown RBP11.08□□□□□ -0.64
LAMB1-203ENST00000393560 PARK7Q99497 189 aaKnown RBP11.08□□□□□ -0.64
LAMB1-203ENST00000393560 MRIQ9BWK5 157 aa11.08□□□□□ -0.64
LAMB1-203ENST00000393560 RAB34Q9BZG1 259 aa11.08□□□□□ -0.64
LAMB1-203ENST00000393560 ASCL3Q9NQ33 180 aa11.08□□□□□ -0.64
LAMB1-203ENST00000393560 PCDHA1Q9Y5I3 950 aa11.08□□□□□ -0.64
LAMB1-203ENST00000393560 LYVE1Q9Y5Y7 322 aa11.08□□□□□ -0.64
LAMB1-203ENST00000393560 SMCHD1A6NHR9 2005 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 KAT6AQ92794 2004 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 COL4A5P29400 1685 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.07□□□□□ -0.64
LAMB1-203ENST00000393560 A0A1W2PQ09 198 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 SPDYE2BA6NHP3 402 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 F5H6K3 240 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 M0QZ92 97 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 PAPSS2O95340 614 aaPredicted RBP11.07□□□□□ -0.64
LAMB1-203ENST00000393560 SPDYE6P0CI01 402 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 FOSL2P15408 326 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 ATP5F1P24539 256 aaPredicted RBP11.07□□□□□ -0.64
LAMB1-203ENST00000393560 KLRC2P26717 231 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 FMO3P31513 532 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 PSME3P61289 254 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 FKBP1AP62942 108 aaKnown RBP11.07□□□□□ -0.64
LAMB1-203ENST00000393560 PPP3CAQ08209 521 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 HYAL2Q12891 473 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 SKP2Q13309 424 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 ZNF177Q13360 481 aaPredicted RBP11.07□□□□□ -0.64
LAMB1-203ENST00000393560 TRAM1Q15629 374 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 OTUD3Q5T2D3 398 aaPredicted RBP11.07□□□□□ -0.64
LAMB1-203ENST00000393560 DPY19L2P1Q6NXN4 242 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 PDZD4Q76G19 769 aaPredicted RBP11.07□□□□□ -0.64
LAMB1-203ENST00000393560 ZNF720Q7Z2F6 126 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 NUP54Q7Z3B4 507 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 SPRED1Q7Z699 444 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 LRIG1Q96JA1 1093 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 RBCK1Q9BYM8 510 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 TMEM39BQ9GZU3 492 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 LTB4R2Q9NPC1 389 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 LYARQ9NX58 379 aaKnown RBP11.07□□□□□ -0.64
LAMB1-203ENST00000393560 MUTYHQ9UIF7 546 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 NEMP1O14524 444 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 ZNF195O14628 629 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 GRID2O43424 1007 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 OIP5O43482 229 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 MT-CYBP00156 380 aaPredicted RBP11.07□□□□□ -0.64
LAMB1-203ENST00000393560 FXR2P51116 673 aaKnown RBP eCLIP11.07□□□□□ -0.64
LAMB1-203ENST00000393560 SEC13P55735 322 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 YWHAHQ04917 246 aaPredicted RBP11.07□□□□□ -0.64
LAMB1-203ENST00000393560 IL18R1Q13478 541 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 HIF1AQ16665 826 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 TIPARPQ7Z3E1 657 aaKnown RBP11.07□□□□□ -0.64
LAMB1-203ENST00000393560 SYVN1Q86TM6 617 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 LRRC18Q8N456 261 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 MYCT1Q8N699 235 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 EXT2Q93063 718 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 CENPNQ96H22 339 aaPredicted RBP11.07□□□□□ -0.64
LAMB1-203ENST00000393560 NKX6-2Q9C056 277 aaPredicted RBP11.07□□□□□ -0.64
LAMB1-203ENST00000393560 SEBOXQ9HB31 216 aaPredicted RBP11.07□□□□□ -0.64
LAMB1-203ENST00000393560 AGPAT4Q9NRZ5 378 aa11.07□□□□□ -0.64
LAMB1-203ENST00000393560 ZNF70Q9UC06 446 aaPredicted RBP11.07□□□□□ -0.64
LAMB1-203ENST00000393560 C10orf71Q711Q0 1435 aa11.06□□□□□ -0.64
LAMB1-203ENST00000393560 MEX3AA1L020 520 aaKnown RBP11.06□□□□□ -0.64
LAMB1-203ENST00000393560 PRORSD1PA6NEY8 169 aa11.06□□□□□ -0.64
LAMB1-203ENST00000393560 URADA6NGE7 173 aa11.06□□□□□ -0.64
LAMB1-203ENST00000393560 FAM86B1E9PN63 330 aa11.06□□□□□ -0.64
LAMB1-203ENST00000393560 MYL12BO14950 172 aa11.06□□□□□ -0.64
LAMB1-203ENST00000393560 DSCR3O14972 297 aa11.06□□□□□ -0.64
LAMB1-203ENST00000393560 GATBO75879 557 aaKnown RBP11.06□□□□□ -0.64
LAMB1-203ENST00000393560 SOAT2O75908 522 aa11.06□□□□□ -0.64
LAMB1-203ENST00000393560 DIRAS3O95661 229 aa11.06□□□□□ -0.64
LAMB1-203ENST00000393560 NR3C1P04150 777 aa11.06□□□□□ -0.64
LAMB1-203ENST00000393560 FAM86B2P0C5J1 330 aa11.06□□□□□ -0.64
LAMB1-203ENST00000393560 MYL12AP19105 171 aa11.06□□□□□ -0.64
LAMB1-203ENST00000393560 TFE3P19532 575 aaPredicted RBP11.06□□□□□ -0.64
LAMB1-203ENST00000393560 CRATP43155 626 aa11.06□□□□□ -0.64
LAMB1-203ENST00000393560 KIR3DL2P43630 455 aa11.06□□□□□ -0.64
LAMB1-203ENST00000393560 PSMD8P48556 350 aa11.06□□□□□ -0.64
LAMB1-203ENST00000393560 ARSEP51690 589 aa11.06□□□□□ -0.64
LAMB1-203ENST00000393560 USF2Q15853 346 aaPredicted RBP11.06□□□□□ -0.64
LAMB1-203ENST00000393560 QRICH1Q2TAL8 776 aa11.06□□□□□ -0.64
LAMB1-203ENST00000393560 TMEM119Q4V9L6 283 aa11.06□□□□□ -0.64
LAMB1-203ENST00000393560 MSS51Q4VC12 460 aa11.06□□□□□ -0.64
LAMB1-203ENST00000393560 ANKRD22Q5VYY1 191 aa11.06□□□□□ -0.64
LAMB1-203ENST00000393560 SLC25A24Q6NUK1 477 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms