RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 IFNA7P01567 189 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 IFI30P13284 250 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 MASP1P48740 699 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 CLCN7P51798 805 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 RPS3AP61247 264 aaKnown RBP12.76□□□□□ -0.37
LCA5-202ENST00000392959 VLDLRP98155 873 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 XKR4Q5GH76 650 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 ATAT1Q5SQI0 421 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 BRAT1Q6PJG6 821 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 TPRG1Q6ZUI0 275 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 MARVELD2Q8N4S9 558 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 KCT2Q8NC54 265 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 RIPOR3Q96MK2 946 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 BARD1Q99728 777 aaKnown RBP12.76□□□□□ -0.37
LCA5-202ENST00000392959 HCN4Q9Y3Q4 1203 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 H0YAE9 185 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 ERI3O43414 337 aaKnown RBP12.76□□□□□ -0.37
LCA5-202ENST00000392959 ARL6IP5O75915 188 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 SNAP29O95721 258 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 ATF4P18848 351 aaPredicted RBP12.76□□□□□ -0.37
LCA5-202ENST00000392959 DNASE1L3Q13609 305 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 SEMA3AQ14563 771 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 GPR68Q15743 365 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 ANKDD1AQ495B1 522 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 MS4A13Q5J8X5 152 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 AGTRAPQ6RW13 159 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 WFIKKN2Q8TEU8 576 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 NCSTNQ92542 709 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 XYLT2Q9H1B5 865 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 SLC6A15Q9H2J7 730 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 CCM2LQ9NUG4 571 aaPredicted RBP12.76□□□□□ -0.37
LCA5-202ENST00000392959 ADAMTS6Q9UKP5 1117 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 CARD8Q9Y2G2 431 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 WDR37Q9Y2I8 494 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 YIPF1Q9Y548 306 aa12.76□□□□□ -0.37
LCA5-202ENST00000392959 CPNE3O75131 537 aaKnown RBP12.75□□□□□ -0.37
LCA5-202ENST00000392959 CNTN5O94779 1100 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 UBXN7O94888 489 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 CEACAM7Q14002 265 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 PTPRCAPQ14761 206 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 SIAH1Q8IUQ4 282 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 SLC15A3Q8IY34 581 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 ZBTB8BQ8NAP8 495 aaPredicted RBP12.75□□□□□ -0.37
LCA5-202ENST00000392959 OR2L5Q8NG80 312 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 NUS1Q96E22 293 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 TUBA1CQ9BQE3 449 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 GPR88Q9GZN0 384 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 POPDC3Q9HBV1 291 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 SPEF1Q9Y4P9 236 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 A0A1W2PRU2 124 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 FAM170BA6NMN3 283 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 TEX46H3BTG2 121 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 AGR2O95994 175 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 TACSTD2P09758 323 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 CHRM1P11229 460 aaPredicted RBP12.75□□□□□ -0.37
LCA5-202ENST00000392959 ACP5P13686 325 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 GLDCP23378 1020 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 TMBIM6P55061 237 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 CDH11P55287 796 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 MAB21L1Q13394 359 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 ARSIQ5FYB1 569 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 NUP54Q7Z3B4 507 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 GHDCQ8N2G8 530 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 CCM2Q9BSQ5 444 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 PRRG4Q9BZD6 226 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 SPEF2Q9C093 1822 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 DFNA5O60443 496 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 RCBTB2O95199 551 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 RENP00797 406 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 JUNP05412 331 aaKnown RBP12.75□□□□□ -0.37
LCA5-202ENST00000392959 CYBRD1Q53TN4 286 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 RUNDC3AQ59EK9 446 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 ARMC10Q8N2F6 343 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 SMPDL3AQ92484 453 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 SLC22A18Q96BI1 424 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 TSGA13Q96PP4 275 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 ZNF382Q96SR6 550 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 MMP27Q9H306 513 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 NEUROD4Q9HD90 331 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 C14orf105Q9NVL8 296 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 TBCCD1Q9NVR7 557 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 HEBP2Q9Y5Z4 205 aa12.75□□□□□ -0.37
LCA5-202ENST00000392959 PRAMEF11O60813 436 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 ZNF3P17036 446 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 ST3GAL3Q11203 375 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 ATP6AP1Q15904 470 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 C4orf46Q504U0 113 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 TICAM1Q8IUC6 712 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 CD244Q9BZW8 370 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 DPAGT1Q9H3H5 408 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 TRIM36Q9NQ86 728 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 ZNF639Q9UID6 485 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 MYOCOSA0A1B0GUC4 107 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 GLTPD2A6NH11 291 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 ELOA3DA6NLF2 546 aaPredicted RBP12.74□□□□□ -0.37
LCA5-202ENST00000392959 SOX14O95416 240 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 CH25HO95992 272 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 ACTR1BP42025 376 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 PGDP52209 483 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 TAS2R50P59544 299 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms