RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 OLR1P78380 273 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 MERTKQ12866 999 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 ARHGEF7Q14155 803 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 ELAVL3Q14576 367 aaKnown RBP18.4■□□□□ 0.54
CCDC50-202ENST00000392456 TECRLQ5HYJ1 363 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 XAF1Q6GPH4 301 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 CRTC3Q6UUV7 619 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 ZYG11AQ6WRX3 759 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 ANKFN1Q8N957 763 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 KDM1BQ8NB78 822 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 PSMA8Q8TAA3 256 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 FANK1Q8TC84 345 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 TTYH2Q9BSA4 534 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 WRAP53Q9BUR4 548 aaKnown RBP18.4■□□□□ 0.54
CCDC50-202ENST00000392456 GATA5Q9BWX5 397 aaPredicted RBP18.4■□□□□ 0.54
CCDC50-202ENST00000392456 BTBD2Q9BX70 525 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 SARS2Q9NP81 518 aaKnown RBP18.4■□□□□ 0.54
CCDC50-202ENST00000392456 TAS2R13Q9NYV9 303 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 LIMD1Q9UGP4 676 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 CRLS1Q9UJA2 301 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 MAN2B2Q9Y2E5 1009 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 ZNF175Q9Y473 711 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 SNX13Q9Y5W8 968 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 AGAP14A8MT82 685 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 PDZK1P1A8MUH7 402 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 ZNF195O14628 629 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 ABCB7O75027 752 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 RETP07949 1114 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 CD1DP15813 335 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 TFEBP19484 476 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 CHRM3P20309 590 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 S100A12P80511 92 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 ACAP2Q15057 778 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 MTSS1LQ765P7 747 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 RNF148Q8N7C7 305 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 KYQ8NBH2 561 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 TXNDC5Q8NBS9 432 aaKnown RBP18.39■□□□□ 0.53
CCDC50-202ENST00000392456 OR8D1Q8WZ84 308 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 NECTIN4Q96NY8 510 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 SORT1Q99523 831 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 GHITMQ9H3K2 345 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 STON1Q9Y6Q2 735 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 TRAV6A0A075B6T7 132 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 PRMT5O14744 637 aaPredicted RBP18.39■□□□□ 0.53
CCDC50-202ENST00000392456 MTX2O75431 263 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 PRNPP04156 253 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 APODP05090 189 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 SERPINE1P05121 402 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 XPAP23025 273 aaPredicted RBP18.39■□□□□ 0.53
CCDC50-202ENST00000392456 MMP12P39900 470 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 PLA2G16P53816 162 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 B4GALNT1Q00973 533 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 RPS27LQ71UM5 84 aaKnown RBP18.39■□□□□ 0.53
CCDC50-202ENST00000392456 CHPFQ8IZ52 775 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 PELI3Q8N2H9 469 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 NXPE1Q8N323 547 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 PIK3C3Q8NEB9 887 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 RHOXF1Q8NHV9 184 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 DMRTB1Q96MA1 342 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 MRPL57Q9BQC6 102 aaKnown RBP18.39■□□□□ 0.53
CCDC50-202ENST00000392456 MCCC2Q9HCC0 563 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 PNPOQ9NVS9 261 aa18.39■□□□□ 0.53
CCDC50-202ENST00000392456 PIKFYVEQ9Y2I7 2098 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 PDGFAP04085 211 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 TIE1P35590 1138 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 RGS19P49795 217 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 NAGLUP54802 743 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 OR4D1Q15615 310 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 VWA5B1Q5TIE3 1220 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 LIPIQ6XZB0 460 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 CERS6Q6ZMG9 384 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 PACRGLQ8N7B6 248 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 TMIEQ8NEW7 156 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 CD200R1Q8TD46 325 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 ZFPM2Q8WW38 1151 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 P2RY13Q9BPV8 354 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 NOL11Q9H8H0 719 aaKnown RBP18.38■□□□□ 0.53
CCDC50-202ENST00000392456 CYP4F12Q9HCS2 524 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 HEBP1Q9NRV9 189 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 TSR3Q9UJK0 312 aaKnown RBP18.38■□□□□ 0.53
CCDC50-202ENST00000392456 OAS3Q9Y6K5 1087 aaKnown RBP18.38■□□□□ 0.53
CCDC50-202ENST00000392456 ANKRD12Q6UB98 2062 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 H0Y858 1186 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 TRIM13O60858 407 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 TRIM16O95361 564 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 TSPAN12O95859 305 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 EEF1B2P24534 225 aaKnown RBP18.38■□□□□ 0.53
CCDC50-202ENST00000392456 DPP6P42658 865 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 KIR2DL1P43626 348 aaPredicted RBP18.38■□□□□ 0.53
CCDC50-202ENST00000392456 CLCN7P51798 805 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 SP140Q13342 867 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 MFSD13AQ14CX5 517 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 ZNF181Q2M3W8 571 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 C2orf27AQ580R0 203 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 CATSPEREQ5SY80 951 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 STEAP3Q658P3 488 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 DPPA4Q7L190 304 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 CHCHD4Q8N4Q1 142 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 CELF2-AS1Q8N7Q2 184 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 EEF1AKMT1Q8WVE0 214 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms