RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 ISLR2Q6UXK2 745 aa15.74■□□□□ 0.11
PTPRK-208ENST00000392449 ZC3H7AQ8IWR0 971 aaKnown RBP15.74■□□□□ 0.11
PTPRK-208ENST00000392449 PPIL6Q8IXY8 311 aa15.74■□□□□ 0.11
PTPRK-208ENST00000392449 OR9A4Q8NGU2 314 aa15.74■□□□□ 0.11
PTPRK-208ENST00000392449 BRIX1Q8TDN6 353 aaKnown RBP15.74■□□□□ 0.11
PTPRK-208ENST00000392449 EEF1AKMT1Q8WVE0 214 aa15.74■□□□□ 0.11
PTPRK-208ENST00000392449 PSMF1Q92530 271 aa15.74■□□□□ 0.11
PTPRK-208ENST00000392449 DRC3Q9H069 523 aa15.74■□□□□ 0.11
PTPRK-208ENST00000392449 EPS8L2Q9H6S3 715 aa15.74■□□□□ 0.11
PTPRK-208ENST00000392449 KLHL42Q9P2K6 505 aa15.74■□□□□ 0.11
PTPRK-208ENST00000392449 SCN3AQ9NY46 2000 aa15.74■□□□□ 0.11
PTPRK-208ENST00000392449 IGHV1-45A0A0A0MS14 117 aa15.73■□□□□ 0.11
PTPRK-208ENST00000392449 OR2W5A6NFC9 320 aa15.73■□□□□ 0.11
PTPRK-208ENST00000392449 E2F3O00716 465 aa15.73■□□□□ 0.11
PTPRK-208ENST00000392449 HEXBP07686 556 aa15.73■□□□□ 0.11
PTPRK-208ENST00000392449 ANXA5P08758 320 aa15.73■□□□□ 0.11
PTPRK-208ENST00000392449 PRR35P0CG20 571 aa15.73■□□□□ 0.11
PTPRK-208ENST00000392449 ENO3P13929 434 aaPredicted RBP15.73■□□□□ 0.11
PTPRK-208ENST00000392449 EMP3P54852 163 aa15.73■□□□□ 0.11
PTPRK-208ENST00000392449 CDKN2DP55273 166 aa15.73■□□□□ 0.11
PTPRK-208ENST00000392449 SRSF11Q05519 484 aaKnown RBP15.73■□□□□ 0.11
PTPRK-208ENST00000392449 DHX9Q08211 1270 aaKnown RBP15.73■□□□□ 0.11
PTPRK-208ENST00000392449 MFAP5Q13361 173 aa15.73■□□□□ 0.11
PTPRK-208ENST00000392449 HP1BP3Q5SSJ5 553 aaPredicted RBP15.73■□□□□ 0.11
PTPRK-208ENST00000392449 B3GNTL1Q67FW5 361 aaPredicted RBP15.73■□□□□ 0.11
PTPRK-208ENST00000392449 NDUFAF7Q7L592 441 aa15.73■□□□□ 0.11
PTPRK-208ENST00000392449 VN1R4Q7Z5H5 301 aa15.73■□□□□ 0.11
PTPRK-208ENST00000392449 IGDCC3Q8IVU1 814 aa15.73■□□□□ 0.11
PTPRK-208ENST00000392449 KBTBD2Q8IY47 623 aa15.73■□□□□ 0.11
PTPRK-208ENST00000392449 ALKBH8Q96BT7 664 aaKnown RBP15.73■□□□□ 0.11
PTPRK-208ENST00000392449 MVB12AQ96EY5 273 aa15.73■□□□□ 0.11
PTPRK-208ENST00000392449 FAM167BQ9BTA0 163 aa15.73■□□□□ 0.11
PTPRK-208ENST00000392449 DDX47Q9H0S4 455 aaKnown RBP15.73■□□□□ 0.11
PTPRK-208ENST00000392449 ATG10Q9H0Y0 220 aa15.73■□□□□ 0.11
PTPRK-208ENST00000392449 TRMT6Q9UJA5 497 aaKnown RBP15.73■□□□□ 0.11
PTPRK-208ENST00000392449 CDC14AQ9UNH5 594 aa15.73■□□□□ 0.11
PTPRK-208ENST00000392449 PDE10AQ9Y233 779 aa15.73■□□□□ 0.11
PTPRK-208ENST00000392449 CRYBG3Q68DQ2 2970 aa15.73■□□□□ 0.11
PTPRK-208ENST00000392449 CROCCQ5TZA2 2017 aa15.73■□□□□ 0.11
PTPRK-208ENST00000392449 FEZF1A0PJY2 475 aa15.72■□□□□ 0.11
PTPRK-208ENST00000392449 NRDCO43847 1150 aa15.72■□□□□ 0.11
PTPRK-208ENST00000392449 PGAM1P18669 254 aa15.72■□□□□ 0.11
PTPRK-208ENST00000392449 TSFMP43897 325 aaKnown RBP15.72■□□□□ 0.11
PTPRK-208ENST00000392449 FNTAP49354 379 aa15.72■□□□□ 0.11
PTPRK-208ENST00000392449 ABATP80404 500 aa15.72■□□□□ 0.11
PTPRK-208ENST00000392449 ELOAQ14241 798 aaKnown RBP15.72■□□□□ 0.11
PTPRK-208ENST00000392449 PPP1R7Q15435 360 aa15.72■□□□□ 0.11
PTPRK-208ENST00000392449 GARNL3Q5VVW2 1013 aa15.72■□□□□ 0.11
PTPRK-208ENST00000392449 PAQR3Q6TCH7 311 aa15.72■□□□□ 0.11
PTPRK-208ENST00000392449 CPAMD8Q8IZJ3 1885 aa15.72■□□□□ 0.11
PTPRK-208ENST00000392449 C2CD4AQ8NCU7 369 aaPredicted RBP15.72■□□□□ 0.11
PTPRK-208ENST00000392449 CALML6Q8TD86 181 aa15.72■□□□□ 0.11
PTPRK-208ENST00000392449 ACTRT1Q8TDG2 376 aa15.72■□□□□ 0.11
PTPRK-208ENST00000392449 CCDC138Q96M89 665 aa15.72■□□□□ 0.11
PTPRK-208ENST00000392449 PWWP2AQ96N64 755 aa15.72■□□□□ 0.11
PTPRK-208ENST00000392449 NAP1L3Q99457 506 aaPredicted RBP15.72■□□□□ 0.11
PTPRK-208ENST00000392449 PLAC1Q9HBJ0 212 aa15.72■□□□□ 0.11
PTPRK-208ENST00000392449 MKKSQ9NPJ1 570 aaPredicted RBP15.72■□□□□ 0.11
PTPRK-208ENST00000392449 CCDC177Q9NQR7 707 aaPredicted RBP15.72■□□□□ 0.11
PTPRK-208ENST00000392449 AGPAT4Q9NRZ5 378 aa15.72■□□□□ 0.11
PTPRK-208ENST00000392449 C14orf105Q9NVL8 296 aa15.72■□□□□ 0.11
PTPRK-208ENST00000392449 UTP6Q9NYH9 597 aaKnown RBP15.72■□□□□ 0.11
PTPRK-208ENST00000392449 ASIC3Q9UHC3 531 aa15.72■□□□□ 0.11
PTPRK-208ENST00000392449 MKL2Q9ULH7 1088 aa15.72■□□□□ 0.11
PTPRK-208ENST00000392449 SLC5A6Q9Y289 635 aa15.72■□□□□ 0.11
PTPRK-208ENST00000392449 POLEQ07864 2286 aa15.72■□□□□ 0.11
PTPRK-208ENST00000392449 IGHV3-20A0A0C4DH32 117 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 WIPF3A6NGB9 483 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 PRPF4O43172 522 aaKnown RBP eCLIP15.71■□□□□ 0.11
PTPRK-208ENST00000392449 ITGAMP11215 1152 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 IL1RNP18510 177 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 CXCR2P25025 360 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 SOX11P35716 441 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 PCOLCEQ15113 449 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 TLR1Q15399 786 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 PHKG1Q16816 387 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 ZNF787Q6DD87 383 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 LANCL3Q6ZV70 420 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 ZGRF1Q86YA3 2104 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 LMNTD2Q8IXW0 634 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 ST6GALNAC3Q8NDV1 305 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 OR1N1Q8NGS0 311 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 ZCCHC10Q8TBK6 192 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 GRK7Q8WTQ7 553 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 VPS50Q96JG6 964 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 TGIF2Q9GZN2 237 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 TRMT1Q9NXH9 659 aaKnown RBP15.71■□□□□ 0.11
PTPRK-208ENST00000392449 HCN3Q9P1Z3 774 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 SNX12Q9UMY4 172 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 COMMD10Q9Y6G5 202 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 NOTCH2Q04721 2471 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 CENPEQ02224 2701 aa15.71■□□□□ 0.11
PTPRK-208ENST00000392449 BMP10O95393 424 aa15.71■□□□□ 0.1
PTPRK-208ENST00000392449 DDAH2O95865 285 aa15.71■□□□□ 0.1
PTPRK-208ENST00000392449 BCL6P41182 706 aa15.71■□□□□ 0.1
PTPRK-208ENST00000392449 CSNK1G2P78368 415 aa15.71■□□□□ 0.1
PTPRK-208ENST00000392449 ARG2P78540 354 aa15.71■□□□□ 0.1
PTPRK-208ENST00000392449 ZXDCQ2QGD7 858 aaPredicted RBP15.71■□□□□ 0.1
PTPRK-208ENST00000392449 FAR1Q8WVX9 515 aa15.71■□□□□ 0.1
PTPRK-208ENST00000392449 LINGO1Q96FE5 620 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms