RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 MEX3BQ6ZN04 569 aaKnown RBP2.79□□□□□ -1.96
PTPRC-205ENST00000391970 PIGWQ7Z7B1 504 aa2.79□□□□□ -1.96
PTPRC-205ENST00000391970 FAM72BQ86X60 149 aa2.79□□□□□ -1.96
PTPRC-205ENST00000391970 MEX3DQ86XN8 651 aaKnown RBP2.79□□□□□ -1.96
PTPRC-205ENST00000391970 CCDC60Q8IWA6 550 aaPredicted RBP2.79□□□□□ -1.96
PTPRC-205ENST00000391970 CLYBLQ8N0X4 340 aa2.79□□□□□ -1.96
PTPRC-205ENST00000391970 LRTM2Q8N967 370 aa2.79□□□□□ -1.96
PTPRC-205ENST00000391970 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.79□□□□□ -1.96
PTPRC-205ENST00000391970 CNBD1Q8NA66 436 aa2.79□□□□□ -1.96
PTPRC-205ENST00000391970 PIK3R3Q92569 461 aa2.79□□□□□ -1.96
PTPRC-205ENST00000391970 DYRK2Q92630 601 aa2.79□□□□□ -1.96
PTPRC-205ENST00000391970 PIGQQ9BRB3 760 aa2.79□□□□□ -1.96
PTPRC-205ENST00000391970 ATG101Q9BSB4 218 aa2.79□□□□□ -1.96
PTPRC-205ENST00000391970 CACNG6Q9BXT2 260 aa2.79□□□□□ -1.96
PTPRC-205ENST00000391970 RIMS4Q9H426 269 aaPredicted RBP2.79□□□□□ -1.96
PTPRC-205ENST00000391970 SRD5A3Q9H8P0 318 aa2.79□□□□□ -1.96
PTPRC-205ENST00000391970 RAVER2Q9HCJ3 691 aaKnown RBP2.79□□□□□ -1.96
PTPRC-205ENST00000391970 IL1RAPL2Q9NP60 686 aa2.79□□□□□ -1.96
PTPRC-205ENST00000391970 RAB9BQ9NP90 201 aa2.79□□□□□ -1.96
PTPRC-205ENST00000391970 IARS2Q9NSE4 1012 aaKnown RBP2.79□□□□□ -1.96
PTPRC-205ENST00000391970 MTRRQ9UBK8 725 aa2.79□□□□□ -1.96
PTPRC-205ENST00000391970 C19orf25Q9UFG5 118 aaPredicted RBP2.79□□□□□ -1.96
PTPRC-205ENST00000391970 NOCTQ9UK39 431 aaKnown RBP2.79□□□□□ -1.96
PTPRC-205ENST00000391970 PA2G4Q9UQ80 394 aaKnown RBP2.79□□□□□ -1.96
PTPRC-205ENST00000391970 RUVBL2Q9Y230 463 aaKnown RBP2.79□□□□□ -1.96
PTPRC-205ENST00000391970 C2CD2Q9Y426 696 aa2.79□□□□□ -1.96
PTPRC-205ENST00000391970 HBS1LQ9Y450 684 aaKnown RBP2.79□□□□□ -1.96
PTPRC-205ENST00000391970 SMCHD1A6NHR9 2005 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 LRRD1A4D1F6 860 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 ERVV-2B6SEH9 535 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 EPHB6O15197 1021 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 PCDH7O60245 1069 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 NME6O75414 186 aaPredicted RBP2.78□□□□□ -1.96
PTPRC-205ENST00000391970 TRMUO75648 421 aaKnown RBP2.78□□□□□ -1.96
PTPRC-205ENST00000391970 KRT33AO76009 404 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 ATP1B1P05026 303 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 CD48P09326 243 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 PATE4P0C8F1 98 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 FAM157CP0CG43 387 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 C8orf89P0DMQ9 161 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 ATP6V1B1P15313 513 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 PIK3R1P27986 724 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 DUTP33316 252 aaKnown RBP2.78□□□□□ -1.96
PTPRC-205ENST00000391970 SFTPDP35247 375 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 CETN2P41208 172 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 NPBWR1P48145 328 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 DNA2P51530 1060 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 STX1BP61266 288 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 C17orf67Q0P5P2 114 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 EXT1Q16394 746 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.78□□□□□ -1.96
PTPRC-205ENST00000391970 KLHL10Q6JEL2 608 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 FAM53AQ6NSI3 398 aaPredicted RBP2.78□□□□□ -1.96
PTPRC-205ENST00000391970 FUT10Q6P4F1 479 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 ZNF790Q6PG37 636 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 TMEM207Q6UWW9 146 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 CPEB2Q7Z5Q1 589 aaKnown RBP2.78□□□□□ -1.96
PTPRC-205ENST00000391970 UNC45BQ8IWX7 931 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 RCOR2Q8IZ40 523 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 CNPY4Q8N129 248 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 C10orf53Q8N6V4 93 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 OR7A2PQ8NGA2 310 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 OR1L3Q8NH93 324 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 METTL21AQ8WXB1 218 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 ANP32BQ92688 251 aaKnown RBP2.78□□□□□ -1.96
PTPRC-205ENST00000391970 PGLYRP2Q96PD5 576 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 BTBD9Q96Q07 612 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 CDCA3Q99618 268 aaPredicted RBP2.78□□□□□ -1.96
PTPRC-205ENST00000391970 PI4K2AQ9BTU6 479 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 UBQLN3Q9H347 655 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 RNF121Q9H920 327 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 PPANQ9NQ55 473 aaKnown RBP2.78□□□□□ -1.96
PTPRC-205ENST00000391970 ZNF71Q9NQZ8 489 aaPredicted RBP2.78□□□□□ -1.96
PTPRC-205ENST00000391970 C2orf42Q9NWW7 574 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 TMEM161AQ9NX61 479 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 WWOXQ9NZC7 414 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 OR6C2Q9NZP2 312 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 FBXL5Q9UKA1 691 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 TCF19Q9Y242 345 aa2.78□□□□□ -1.96
PTPRC-205ENST00000391970 IGHV4-4A0A075B6R2 117 aa2.77□□□□□ -1.97
PTPRC-205ENST00000391970 TRAV18A0A075B6X5 111 aa2.77□□□□□ -1.97
PTPRC-205ENST00000391970 MSGN1A6NI15 193 aa2.77□□□□□ -1.97
PTPRC-205ENST00000391970 SNURFLB1AK76 121 aa2.77□□□□□ -1.97
PTPRC-205ENST00000391970 NPIPA3F8WFD2 350 aa2.77□□□□□ -1.97
PTPRC-205ENST00000391970 TTI1O43156 1089 aa2.77□□□□□ -1.97
PTPRC-205ENST00000391970 EXTL3O43909 919 aa2.77□□□□□ -1.97
PTPRC-205ENST00000391970 CDC123O75794 336 aaPredicted RBP2.77□□□□□ -1.97
PTPRC-205ENST00000391970 GLCEO94923 617 aa2.77□□□□□ -1.97
PTPRC-205ENST00000391970 AP2A2O94973 939 aa2.77□□□□□ -1.97
PTPRC-205ENST00000391970 EML2O95834 649 aa2.77□□□□□ -1.97
PTPRC-205ENST00000391970 PAK4O96013 591 aaPredicted RBP2.77□□□□□ -1.97
PTPRC-205ENST00000391970 SP9P0CG40 484 aa2.77□□□□□ -1.97
PTPRC-205ENST00000391970 DLATP10515 647 aaKnown RBP2.77□□□□□ -1.97
PTPRC-205ENST00000391970 UROSP10746 265 aa2.77□□□□□ -1.97
PTPRC-205ENST00000391970 SSTR1P30872 391 aa2.77□□□□□ -1.97
PTPRC-205ENST00000391970 CDKN1AP38936 164 aa2.77□□□□□ -1.97
PTPRC-205ENST00000391970 KHKP50053 298 aa2.77□□□□□ -1.97
PTPRC-205ENST00000391970 CLDN17P56750 224 aa2.77□□□□□ -1.97
PTPRC-205ENST00000391970 KCNJ10P78508 379 aa2.77□□□□□ -1.97
PTPRC-205ENST00000391970 MYL7Q01449 175 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms