RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 SRSF6Q13247 344 aaKnown RBP14.37□□□□□ -0.11
IGHV3-53-201ENST00000390627 DNASE1L3Q13609 305 aa14.37□□□□□ -0.11
IGHV3-53-201ENST00000390627 COL28A1Q2UY09 1125 aa14.37□□□□□ -0.11
IGHV3-53-201ENST00000390627 C18orf21Q32NC0 220 aaPredicted RBP14.37□□□□□ -0.11
IGHV3-53-201ENST00000390627 CATSPEREQ5SY80 951 aa14.37□□□□□ -0.11
IGHV3-53-201ENST00000390627 INO80CQ6PI98 192 aaPredicted RBP14.37□□□□□ -0.11
IGHV3-53-201ENST00000390627 C19orf48Q6RUI8 117 aa14.37□□□□□ -0.11
IGHV3-53-201ENST00000390627 ZNF517Q6ZMY9 492 aaPredicted RBP14.37□□□□□ -0.11
IGHV3-53-201ENST00000390627 PLD3Q8IV08 490 aa14.37□□□□□ -0.11
IGHV3-53-201ENST00000390627 OR4N4Q8N0Y3 316 aa14.37□□□□□ -0.11
IGHV3-53-201ENST00000390627 OR4K1Q8NGD4 311 aa14.37□□□□□ -0.11
IGHV3-53-201ENST00000390627 CT55Q8WUE5 264 aa14.37□□□□□ -0.11
IGHV3-53-201ENST00000390627 UBTD2Q8WUN7 234 aa14.37□□□□□ -0.11
IGHV3-53-201ENST00000390627 SLC45A3Q96JT2 553 aa14.37□□□□□ -0.11
IGHV3-53-201ENST00000390627 AIF1LQ9BQI0 150 aa14.37□□□□□ -0.11
IGHV3-53-201ENST00000390627 FAM117AQ9C073 453 aa14.37□□□□□ -0.11
IGHV3-53-201ENST00000390627 DHCR7Q9UBM7 475 aaKnown RBP14.37□□□□□ -0.11
IGHV3-53-201ENST00000390627 TMCO1Q9UM00 188 aa14.37□□□□□ -0.11
IGHV3-53-201ENST00000390627 ANKRD11Q6UB99 2663 aaPredicted RBP14.37□□□□□ -0.11
IGHV3-53-201ENST00000390627 USP24Q9UPU5 2620 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 TRBC2A0A5B9 178 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 HYKKA2RU49 373 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 SMIM23A6NLE4 172 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 ZNF891A8MT65 544 aaPredicted RBP14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 DSCR3O14972 297 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 EFSO43281 561 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 CCNT2O60583 730 aaKnown RBP14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 MTHFD2P13995 350 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 ALAS2P22557 587 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 SLCO1A2P46721 670 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 GCGRP47871 477 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 RPS15P62841 145 aaKnown RBP14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 DCDP81605 110 aaKnown RBP14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 REEP5Q00765 189 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 IFFO1Q0D2I5 559 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 PDK4Q16654 411 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 MUM1Q2TAK8 710 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 PRTGQ2VWP7 1150 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 C1orf189Q5VU69 101 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 GARNL3Q5VVW2 1013 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 ZNF385CQ66K41 422 aaPredicted RBP14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 NXPE4Q6UWF7 544 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 TTLL10Q6ZVT0 673 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 RIBC1Q8N443 379 aaPredicted RBP14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 MREGQ8N565 214 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 SNX31Q8N9S9 440 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 CAMKVQ8NCB2 501 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 EPS8L3Q8TE67 593 aaKnown RBP14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 GBP5Q96PP8 586 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 MRPL57Q9BQC6 102 aaKnown RBP14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 SARGQ9BW04 601 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 GPR87Q9BY21 358 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 CD244Q9BZW8 370 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 CHST8Q9H2A9 424 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 CPNE5Q9HCH3 593 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 STARD5Q9NSY2 213 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 CPSF2Q9P2I0 782 aaKnown RBP14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 XPR1Q9UBH6 696 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 OPTCQ9UBM4 332 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 NDOR1Q9UHB4 597 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 PCDHGA6Q9Y5G7 932 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 PCDHGA4Q9Y5G9 962 aa14.36□□□□□ -0.11
IGHV3-53-201ENST00000390627 FEZF1A0PJY2 475 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 K7EPI3 171 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 MAP2K7O14733 419 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 TERTO14746 1132 aaKnown RBP14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 CLGNO14967 610 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 KLK8O60259 260 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 RAB40ALP0C0E4 278 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 SLC35G6P0C7Q6 338 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 PIM1P11309 404 aaPredicted RBP14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 KRT15P19012 456 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 CXCR2P25025 360 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 BCL6P41182 706 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 ALDH18A1P54886 795 aaKnown RBP14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 MC1RQ01726 317 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 SETDB1Q15047 1291 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 NDUFA9Q16795 377 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 FBXO48Q5FWF7 155 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 ARHGAP40Q5TG30 622 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 FAM199XQ6PEV8 388 aaPredicted RBP14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 MFSD9Q8NBP5 474 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 MZB1Q8WU39 189 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 SNRNP27Q8WVK2 155 aaKnown RBP14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 STARD8Q92502 1023 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 ESAMQ96AP7 390 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 MRPL46Q9H2W6 279 aaKnown RBP14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 EHD1Q9H4M9 534 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 PRORYQ9H606 182 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 AKIRIN1Q9H9L7 192 aaPredicted RBP14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 ZNF358Q9NW07 568 aa14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 IFT80Q9P2H3 777 aaPredicted RBP14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 RUVBL1Q9Y265 456 aaKnown RBP14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 TNPO3Q9Y5L0 923 aaKnown RBP14.35□□□□□ -0.11
IGHV3-53-201ENST00000390627 MDC1Q14676 2089 aaKnown RBP14.34□□□□□ -0.11
IGHV3-53-201ENST00000390627 PTPRQQ9UMZ3 2332 aa14.34□□□□□ -0.11
IGHV3-53-201ENST00000390627 OR1F1O43749 312 aa14.34□□□□□ -0.11
IGHV3-53-201ENST00000390627 SMIM24O75264 130 aa14.34□□□□□ -0.11
IGHV3-53-201ENST00000390627 H2AFYO75367 372 aaKnown RBP14.34□□□□□ -0.11
IGHV3-53-201ENST00000390627 KATNA1O75449 491 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms