RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 SLC24A2Q9UI40 661 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 PRDM4Q9UKN5 801 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 SELENOKQ9Y6D0 94 aa2.56□□□□□ -2
TRAV40-201ENST00000390467 ZNF840PA6NDX5 716 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 SURF4O15260 269 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 IPO8O15397 1037 aaKnown RBP2.55□□□□□ -2
TRAV40-201ENST00000390467 ADAM20O43506 726 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 ZNF354AO60765 605 aaPredicted RBP2.55□□□□□ -2
TRAV40-201ENST00000390467 HPP00738 406 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 CSN3P07498 182 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 PRG2P13727 222 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 MYOGP15173 224 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 AOC1P19801 751 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 AZGP1P25311 298 aaKnown RBP2.55□□□□□ -2
TRAV40-201ENST00000390467 ATP4BP51164 291 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 RASGEF1BQ0VAM2 473 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 STK4Q13043 487 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 RILPL1Q5EBL4 403 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 C3P1Q6ZMU1 363 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 IGSF1Q8N6C5 1336 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 OR10G7Q8NGN6 311 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 SSC4DQ8WTU2 575 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 ATL1Q8WXF7 558 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 JAKMIP2Q96AA8 810 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 MUS81Q96NY9 551 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 GCNAQ96QF7 691 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 CPNE1Q99829 537 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 CCDC28BQ9BUN5 200 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 PRRG4Q9BZD6 226 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 GPR88Q9GZN0 384 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 NOL11Q9H8H0 719 aaKnown RBP2.55□□□□□ -2
TRAV40-201ENST00000390467 TBC1D22BQ9NU19 505 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 GTSE1Q9NYZ3 720 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 BAIAP2L1Q9UHR4 511 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 CPSF3Q9UKF6 684 aaKnown RBP2.55□□□□□ -2
TRAV40-201ENST00000390467 ELF5Q9UKW6 265 aaPredicted RBP2.55□□□□□ -2
TRAV40-201ENST00000390467 GPR34Q9UPC5 381 aa2.55□□□□□ -2
TRAV40-201ENST00000390467 PA2G4Q9UQ80 394 aaKnown RBP2.55□□□□□ -2
TRAV40-201ENST00000390467 ATP6AP2O75787 350 aa2.54□□□□□ -2
TRAV40-201ENST00000390467 BEST1O76090 585 aa2.54□□□□□ -2
TRAV40-201ENST00000390467 EPCAMP16422 314 aa2.54□□□□□ -2
TRAV40-201ENST00000390467 ALOX12P18054 663 aa2.54□□□□□ -2
TRAV40-201ENST00000390467 KHKP50053 298 aa2.54□□□□□ -2
TRAV40-201ENST00000390467 OR1D5P58170 312 aa2.54□□□□□ -2
TRAV40-201ENST00000390467 POLR2LP62875 67 aaKnown RBP2.54□□□□□ -2
TRAV40-201ENST00000390467 UBXN2AP68543 259 aa2.54□□□□□ -2
TRAV40-201ENST00000390467 FKBP3Q00688 224 aaKnown RBP2.54□□□□□ -2
TRAV40-201ENST00000390467 SGCGQ13326 291 aa2.54□□□□□ -2
TRAV40-201ENST00000390467 SIM2Q14190 667 aaPredicted RBP2.54□□□□□ -2
TRAV40-201ENST00000390467 ZNF146Q15072 292 aa2.54□□□□□ -2
TRAV40-201ENST00000390467 ITPRIPL1Q6GPH6 555 aa2.54□□□□□ -2
TRAV40-201ENST00000390467 CAMKMTQ7Z624 323 aa2.54□□□□□ -2
TRAV40-201ENST00000390467 KCNMB4Q86W47 210 aa2.54□□□□□ -2
TRAV40-201ENST00000390467 GPC2Q8N158 579 aa2.54□□□□□ -2
TRAV40-201ENST00000390467 RTL3Q8N8U3 475 aaKnown RBP2.54□□□□□ -2
TRAV40-201ENST00000390467 RASGEF1AQ8N9B8 481 aa2.54□□□□□ -2
TRAV40-201ENST00000390467 KLHL30-AS1Q8NEE0 82 aa2.54□□□□□ -2
TRAV40-201ENST00000390467 TSPAN14Q8NG11 270 aa2.54□□□□□ -2
TRAV40-201ENST00000390467 ROBO4Q8WZ75 1007 aa2.54□□□□□ -2
TRAV40-201ENST00000390467 ATF6BQ99941 703 aa2.54□□□□□ -2
TRAV40-201ENST00000390467 KLHL4Q9C0H6 718 aa2.54□□□□□ -2
TRAV40-201ENST00000390467 DNAJC4Q9NNZ3 241 aa2.54□□□□□ -2
TRAV40-201ENST00000390467 DDX25Q9UHL0 483 aaKnown RBP2.54□□□□□ -2
TRAV40-201ENST00000390467 PPIEQ9UNP9 301 aaKnown RBP2.54□□□□□ -2
TRAV40-201ENST00000390467 KLF2Q9Y5W3 355 aaPredicted RBP2.54□□□□□ -2
TRAV40-201ENST00000390467 RALGAPA1Q6GYQ0 2036 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 A0A087WWV3 80 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 SPRY1O43609 319 aaPredicted RBP2.53□□□□□ -2
TRAV40-201ENST00000390467 PRDM1O75626 825 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 GSRP00390 522 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 ATP5BP06576 529 aaKnown RBP2.53□□□□□ -2
TRAV40-201ENST00000390467 EDNRAP25101 427 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 ACTN2P35609 894 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 PRELPP51888 382 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 OPCMLQ14982 345 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 NONOQ15233 471 aaKnown RBP eCLIP2.53□□□□□ -2
TRAV40-201ENST00000390467 ALDH1L2Q3SY69 923 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 REG3GQ6UW15 175 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 VITQ6UXI7 678 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
TRAV40-201ENST00000390467 OR4N5Q8IXE1 308 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 SYT2Q8N9I0 419 aaPredicted RBP2.53□□□□□ -2
TRAV40-201ENST00000390467 TC2NQ8N9U0 490 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 TDRD5Q8NAT2 981 aaKnown RBP2.53□□□□□ -2
TRAV40-201ENST00000390467 NOA1Q8NC60 698 aaKnown RBP2.53□□□□□ -2
TRAV40-201ENST00000390467 OR52B6Q8NGF0 335 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 KCNE4Q8WWG9 221 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 METTL21AQ8WXB1 218 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 OTUB1Q96FW1 271 aaPredicted RBP2.53□□□□□ -2
TRAV40-201ENST00000390467 LINC00615Q96LM1 132 aaPredicted RBP2.53□□□□□ -2
TRAV40-201ENST00000390467 FEVQ99581 238 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 NAP1L4Q99733 375 aaKnown RBP2.53□□□□□ -2
TRAV40-201ENST00000390467 CCDC106Q9BWC9 280 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 CHMP4AQ9BY43 222 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 JPT2Q9H910 190 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 RAVER2Q9HCJ3 691 aaKnown RBP2.53□□□□□ -2
TRAV40-201ENST00000390467 NLGN3Q9NZ94 848 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 CPSF2Q9P2I0 782 aaKnown RBP2.53□□□□□ -2
TRAV40-201ENST00000390467 CHORDC1Q9UHD1 332 aaPredicted RBP2.53□□□□□ -2
TRAV40-201ENST00000390467 CELA1Q9UNI1 258 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms