RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 A0A096LPI6 279 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 MANBAO00462 879 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 AP3D1O14617 1153 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 C21orf33P30042 268 aaPredicted RBP13.85□□□□□ -0.19
RTF1-201ENST00000389629 UQCRC1P31930 480 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 SRSF11Q05519 484 aaKnown RBP13.85□□□□□ -0.19
RTF1-201ENST00000389629 LIPKQ5VXJ0 399 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 ZNF613Q6PF04 617 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 METTL4Q8N3J2 472 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 RAB42Q8N4Z0 105 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 GINS4Q9BRT9 223 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 GSDMCQ9BYG8 508 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 THG1LQ9NWX6 298 aaKnown RBP13.85□□□□□ -0.19
RTF1-201ENST00000389629 PCTPQ9UKL6 214 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 POFUT2Q9Y2G5 429 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 KCNE2Q9Y6J6 123 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 ANKRD34BA5PLL1 514 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 SGTAO43765 313 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 SEC14L2O76054 403 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 MANFP55145 182 aaKnown RBP13.85□□□□□ -0.19
RTF1-201ENST00000389629 ERVPABLB-1P60509 514 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 HSF2Q03933 536 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 SERINC3Q13530 473 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 POM121L1PQ3SYA9 428 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 BCL7AQ4VC05 210 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 PRSS48Q7RTY5 328 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 ARHGAP12Q8IWW6 846 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 CELF2-AS1Q8N7Q2 184 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 AQP11Q8NBQ7 271 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 KLHL6Q8WZ60 621 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 TTPALQ9BTX7 342 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 CCSER2Q9H7U1 834 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 LTB4R2Q9NPC1 389 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 NLE1Q9NVX2 485 aaPredicted RBP13.85□□□□□ -0.19
RTF1-201ENST00000389629 ARFGEF1Q9Y6D6 1849 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 EFCAB14O75071 495 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 NME6O75414 186 aaPredicted RBP13.84□□□□□ -0.19
RTF1-201ENST00000389629 KHDRBS3O75525 346 aaKnown RBP13.84□□□□□ -0.19
RTF1-201ENST00000389629 OR5F1O95221 314 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 GPAT3Q53EU6 434 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 TMPRSS11BQ86T26 416 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 RGL4Q8IZJ4 473 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 IGSF8Q969P0 613 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 TMEM169Q96HH4 297 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 TPT1P8Q9HAU6 139 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 INIPQ9NRY2 104 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 TRAV6A0A075B6T7 132 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 ANKRD66B4E2M5 251 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 TLR4O00206 839 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 DLGAP1O14490 977 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 GPR32O75388 356 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 TEAD4Q15561 434 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 NDUFAF6Q330K2 333 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 VARS2Q5ST30 1063 aaKnown RBP13.84□□□□□ -0.19
RTF1-201ENST00000389629 PSAPL1Q6NUJ1 521 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 CHMP1BQ7LBR1 199 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 UMODL1-AS1Q8N2C9 162 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 C10orf53Q8N6V4 93 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 DNAJB8Q8NHS0 232 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 DEDD2Q8WXF8 326 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 AKAP1Q92667 903 aaKnown RBP eCLIP13.84□□□□□ -0.19
RTF1-201ENST00000389629 SNAPC3Q92966 411 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 CLP1Q92989 425 aaKnown RBP13.84□□□□□ -0.19
RTF1-201ENST00000389629 RACGAP1Q9H0H5 632 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 FAM83DQ9H4H8 585 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 MAT2BQ9NZL9 334 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 FNIP2Q9P278 1114 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 RPL36Q9Y3U8 105 aaKnown RBP13.84□□□□□ -0.19
RTF1-201ENST00000389629 PTGESO14684 152 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 KDM4BO94953 1096 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 SPAM1P38567 509 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 RPA4Q13156 261 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 SELPLGQ14242 412 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 RFTN2Q52LD8 501 aaPredicted RBP13.84□□□□□ -0.19
RTF1-201ENST00000389629 RNF180Q86T96 592 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 MFSD6LQ8IWD5 586 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 PARP16Q8N5Y8 322 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 PAPD5Q8NDF8 572 aaKnown RBP13.84□□□□□ -0.19
RTF1-201ENST00000389629 TNKS2Q9H2K2 1166 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 R3HDMLQ9H3Y0 253 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 KRCC1Q9NPI7 259 aaPredicted RBP13.84□□□□□ -0.19
RTF1-201ENST00000389629 ITM2BQ9Y287 266 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 SLC35F4A4IF30 521 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 INMT-MINDY4F8WBC2 141 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 KCNC1P48547 511 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 KCNA10Q16322 511 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 TNFAIP8L2Q6P589 184 aaPredicted RBP13.84□□□□□ -0.19
RTF1-201ENST00000389629 CXXC5Q7LFL8 322 aaKnown RBP13.84□□□□□ -0.19
RTF1-201ENST00000389629 ZMIZ2Q8NF64 920 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 UFD1Q92890 307 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 MUL1Q969V5 352 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 KLHL31Q9H511 634 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 GRIP1Q9Y3R0 1128 aa13.84□□□□□ -0.19
RTF1-201ENST00000389629 UBE2QL1A1L167 161 aa13.83□□□□□ -0.19
RTF1-201ENST00000389629 M0R129 80 aa13.83□□□□□ -0.19
RTF1-201ENST00000389629 CTDSP2O14595 271 aa13.83□□□□□ -0.19
RTF1-201ENST00000389629 SNAI1O95863 264 aaPredicted RBP13.83□□□□□ -0.19
RTF1-201ENST00000389629 CHRNB1P11230 501 aa13.83□□□□□ -0.19
RTF1-201ENST00000389629 STAT5AP42229 794 aa13.83□□□□□ -0.19
RTF1-201ENST00000389629 STARP49675 285 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms